Protein Info for ABIE51_RS10125 in Lysobacter sp. OAE881

Annotation: proton-conducting transporter membrane subunit

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 531 signal peptide" amino acids 5 to 5 (1 residues), see Phobius details transmembrane" amino acids 6 to 24 (19 residues), see Phobius details amino acids 30 to 48 (19 residues), see Phobius details amino acids 60 to 85 (26 residues), see Phobius details amino acids 97 to 117 (21 residues), see Phobius details amino acids 122 to 139 (18 residues), see Phobius details amino acids 151 to 172 (22 residues), see Phobius details amino acids 197 to 218 (22 residues), see Phobius details amino acids 226 to 247 (22 residues), see Phobius details amino acids 259 to 279 (21 residues), see Phobius details amino acids 287 to 308 (22 residues), see Phobius details amino acids 316 to 336 (21 residues), see Phobius details amino acids 347 to 369 (23 residues), see Phobius details amino acids 381 to 401 (21 residues), see Phobius details amino acids 414 to 433 (20 residues), see Phobius details amino acids 444 to 466 (23 residues), see Phobius details amino acids 510 to 528 (19 residues), see Phobius details PF00361: Proton_antipo_M" amino acids 117 to 370 (254 residues), 103.2 bits, see alignment E=8.1e-34

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (531 amino acids)

>ABIE51_RS10125 proton-conducting transporter membrane subunit (Lysobacter sp. OAE881)
MNAWIAAALATPCLLLLACVSLRLRSRMPALLAFAPLPALLAGLLASYDVPLRIGSARFA
LVFALDVPGAMLLGAAALLWIVAGVHARGHLVGRPDAGAFVVAWLMTLTGCVGVFLAADV
VGFYFLLALLSVGAAGLVLQGQGAQALRAGAIYLGVALFAEAFLLAGLILAVQASPSGSL
LIADVAATLASSQSSDLALTLLVVGLGIKAGLVPFHFWMPLAYGAAPVPAAAVLSGAVVK
ASLLAMVRLLPFDTALPEFGLPLACVGMFGALYGVAVGITRSNAKLVLAYSSVSQMGFVM
AIVGMGLATGNAATPLVAAFYAVHHLLVKGALFLCVDAVPATRARAVLVPAGVIALGLAG
LPLAGGFVAKYAAKDVFGEGAFATLAVASSVATAWLMCHLLRRLAVDANLSARFSWTWFA
MAFACVFVPWWIYVATPIGTASALLAASVLRSSLWPVLAGGALALATVRTGIRWPAVPAG
DVGAMLRGLERLAGRIATAFQQGDIVVRRWHVASVALLLIAAAFYWTLRAP