Protein Info for ABIE51_RS07920 in Lysobacter sp. OAE881

Annotation: glycosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 389 PF13439: Glyco_transf_4" amino acids 19 to 185 (167 residues), 59.7 bits, see alignment E=9.4e-20 PF13579: Glyco_trans_4_4" amino acids 19 to 183 (165 residues), 60.3 bits, see alignment E=7.5e-20 PF00534: Glycos_transf_1" amino acids 197 to 351 (155 residues), 113.9 bits, see alignment E=1.6e-36 PF13692: Glyco_trans_1_4" amino acids 209 to 344 (136 residues), 107.1 bits, see alignment E=2.2e-34 PF13524: Glyco_trans_1_2" amino acids 292 to 372 (81 residues), 28 bits, see alignment E=5.2e-10

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (389 amino acids)

>ABIE51_RS07920 glycosyltransferase (Lysobacter sp. OAE881)
MSQSRPFALQVRSSAGLYGADRVVLALNRALDRGGARGRLLSINNYRMHEQALHDVASSS
GQDAVLLPCRGRVDAATIGALSAQIGAARGRTGTPPVVHVHDYKSAFYAWLATRREHHSG
QPAPLVATLHGWVEGSTALRLYTRLELALLRRFDALVVVASEQIDRLARAGVPRSRIRHV
DNGIECPVRDEVAASALRAQLRIAPDAHVFSAVARLSSEKNLAMLLRAFAPVASRHPHAV
LLIVGDGPEREALETLAGELALNGRVRFLGMRHDMPAIYTLTDHLVLPSLTEGMPLVVLE
AMACEVPVIASAVGDIPRLLERSAHGRTVPPGDAVALESALEAAVTTPRARDIAARDFVR
ERHSAQAMAAAYVTLYRELLEARHARRAS