Protein Info for ABIE51_RS06220 in Lysobacter sp. OAE881

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 420 transmembrane" amino acids 16 to 35 (20 residues), see Phobius details amino acids 53 to 73 (21 residues), see Phobius details amino acids 85 to 104 (20 residues), see Phobius details amino acids 110 to 132 (23 residues), see Phobius details amino acids 144 to 164 (21 residues), see Phobius details amino acids 170 to 192 (23 residues), see Phobius details amino acids 229 to 249 (21 residues), see Phobius details amino acids 262 to 285 (24 residues), see Phobius details amino acids 293 to 311 (19 residues), see Phobius details amino acids 317 to 341 (25 residues), see Phobius details amino acids 350 to 372 (23 residues), see Phobius details amino acids 384 to 403 (20 residues), see Phobius details PF07690: MFS_1" amino acids 27 to 369 (343 residues), 106.9 bits, see alignment E=5.3e-35 amino acids 266 to 414 (149 residues), 37.2 bits, see alignment E=8.4e-14

Best Hits

KEGG orthology group: None (inferred from 67% identity to rpe:RPE_1544)

Predicted SEED Role

"Transmembrane transport protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (420 amino acids)

>ABIE51_RS06220 MFS transporter (Lysobacter sp. OAE881)
MTTPLSADAPHPATRYWPLVLAATAMLMITMGVRQSMGLFVAPIGQSTGLTVAQISFALA
IGQFVWGAVQPVFGAIADQRGPGRVLVFGGLLLAAGMALAPALASEWGLLLTLGVLSAAG
AGAGSFSILIGATAQHMPAEKRSMAAGVINAGGSFGQFLFAPLVQAVISVAGWGVAMFTL
AASALATLPLAWPLRRRAASTPQTAANATPTPGIGLREQLRIAVRDRSYWMLHLGFFTCG
VHIAFLVTHLPGEIALCGLPASVSAVSLALIGLFNVAGSLGAGWLGQRFRMKYLLAAMYA
SRAVLIAIYLISPPTPLTFFLFSAALGLTWLATVPPTAGLVGKLFGPRYLGTLFGLTLLS
HQLGGFFGAWVGGLVLERFGDYSWMWYADMALALIAAAANLPIRESASAPIRAQTQAQPT