Protein Info for ABIE51_RS03705 in Lysobacter sp. OAE881

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 493 transmembrane" amino acids 21 to 39 (19 residues), see Phobius details amino acids 46 to 72 (27 residues), see Phobius details amino acids 84 to 102 (19 residues), see Phobius details amino acids 113 to 134 (22 residues), see Phobius details amino acids 152 to 177 (26 residues), see Phobius details amino acids 188 to 207 (20 residues), see Phobius details amino acids 234 to 258 (25 residues), see Phobius details amino acids 305 to 325 (21 residues), see Phobius details amino acids 337 to 355 (19 residues), see Phobius details amino acids 361 to 384 (24 residues), see Phobius details amino acids 403 to 430 (28 residues), see Phobius details amino acids 449 to 469 (21 residues), see Phobius details TIGR00792: sugar (Glycoside-Pentoside-Hexuronide) transporter" amino acids 13 to 275 (263 residues), 237.6 bits, see alignment E=1.1e-74 PF13347: MFS_2" amino acids 15 to 283 (269 residues), 172.5 bits, see alignment E=1.1e-54 amino acids 306 to 473 (168 residues), 116.8 bits, see alignment E=9.2e-38 PF07690: MFS_1" amino acids 278 to 477 (200 residues), 41.4 bits, see alignment E=9e-15

Best Hits

KEGG orthology group: None (inferred from 77% identity to psu:Psesu_2907)

Predicted SEED Role

"transport protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (493 amino acids)

>ABIE51_RS03705 MFS transporter (Lysobacter sp. OAE881)
MNSTSEPLSVTEKIGYSLGDLAANLIFQTLVTFLAFFYTDVYRIPAATAATIIFIGGILG
AFVFTPIVGIAADRTNTRWGKFRPWILWTAIPFGVFSLLAFSTPDLAPGAKVAYAMGTYT
LLVMIYAANNLPYSALSGVLTGSMAQRNSLSAYRFVAVMVAQFIIQALLLPLVLILGDGD
KVRGFHNTMMLFAIVGTVFFLITFFTTKERIVPAPEQKSSVKQDLSDLARNRPWVVMLML
TILVFVTLALKGGMYVYYFKYYLSEPHLAGFLDEVGFNGFIAGLNSVLTGMGLTEFQWPK
DAPTSALSLFNAGGIIFMILGIGFSKKLADRLGKRDVFGGALLVSTLFMLVFLLFPPQAT
WVVFGAQILHGFFYGITIPLLWAMIADVADYSEWKNHRRATAIIFSAMLCGLKIGLSVGG
ASVAGILAYYGYNADAAMQSPQTVDGIRLAVSLYASIPFLLCVVLLFLYEINKPMESRIE
QELTARRLQTASA