Protein Info for ABIE51_RS02990 in Lysobacter sp. OAE881
Annotation: molybdopterin oxidoreductase family protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
"Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.5.3)" (EC 1.8.5.3)
MetaCyc Pathways
- NADH to dimethyl sulfoxide electron transfer (1/2 steps found)
- formate to dimethyl sulfoxide electron transfer (1/2 steps found)
- hydrogen to dimethyl sulfoxide electron transfer (1/2 steps found)
Isozymes
Compare fitness of predicted isozymes for: 1.8.5.3
Use Curated BLAST to search for 1.8.5.3
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (1010 amino acids)
>ABIE51_RS02990 molybdopterin oxidoreductase family protein (Lysobacter sp. OAE881) MRQPEPAIDTSPSIGDEVKTTTCYMCACRCGIKVWLKDGQIRYIQGNPDHPVNQGVLCAK GSAGIMQHYSPARLDKPLLRVGERGSGEFREIEWDEALDIAASWLKPIRERNPDKLAFFT GRDQSQALTGWWAQQFGTVNYAAHGGFCSVNMAAAGLYTVGGSFWEFGEPDWDHTQYLML WGVAEDHDSNPIKLGLGKLKARGAKIVAVNPVRSGYGAIADEWIGIRPGTDGLFAFALIH ELLNADRIDLDYLVRYTNAHWLVVDDPGGAEDGLFARDLEGHPLCAIDSHRFARANDTGI APRVVGEYTLRDGRRAVPAFHLVAQRYLDPQYSPDAVSERCGIPADTIRRIARELAEAAF DRAFKLPIAWTDAWGREHDSMQGRPVSMHAMRGISAHSNGFHTCRALHVLQMLLGAVDAP GSFRYQPPFPKPLPPPNRPGKARQANGVLDAAPLGFVHGPEDLVVDEAGAPRRIDHAFSW AYPLSAHGMMHTVIRNAWAGDPYPIDTLMMFMANMSWNSSMNTAQTIAWLTDKRDDGEYR IPRIIYADAYASEMVAYADLVLPDTTYLERFDAISLLDRPISDADGAADAIRHPVLDSAK QREGRDVRGFQSVLIDLGARIGLPGLTNEDGSPKYRDYADYIVRHERAPGVGLLAGWRGA HGEVEAKGQPNPQQLQRYIDNGGFWRSEVPEDARYFKMANRGYLDWAQKMGFLGHADPIV LQLYSETIQKFRLAAQGHGAVQPPDEHRERVATYFDPIPLWYEPLEGAQVERAARAARHE ESESRTRTAITPPLPSAGEGWGEGDSGGELAGGTSPLPNPPLRAGEGDHPFPLSAVTQRP MFMYHAWGSQNAWLRQIATRNWLYLHPDTAARHGIRDEDWIEVTSHHGTITVQAKFAANV QPDTVWTWNAIGKRRGAWKLGKDAPEGRQGFLLNHLISDITPRGDYANADPVTGQAAWFD LRVRITRSAPKDGAVRESSPQFAPLAMGEADDAPLRYGAQFRAKREGTSS