Protein Info for ABIE51_RS02610 in Lysobacter sp. OAE881

Annotation: DoxX family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 225 transmembrane" amino acids 21 to 37 (17 residues), see Phobius details amino acids 63 to 87 (25 residues), see Phobius details amino acids 93 to 112 (20 residues), see Phobius details amino acids 138 to 158 (21 residues), see Phobius details amino acids 178 to 211 (34 residues), see Phobius details PF07681: DoxX" amino acids 27 to 111 (85 residues), 75 bits, see alignment E=3.1e-25

Best Hits

Predicted SEED Role

"FIG035246: DoxX family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (225 amino acids)

>ABIE51_RS02610 DoxX family protein (Lysobacter sp. OAE881)
MSTSLSRRAAPPFFSRVDGVGQWLSPLGLRVLLAWEFFEAGLEKLHGANWFADLGDKFPL
PFSLFSANVNWTAAMWLELAGGVALLLGLGTRYVAAALFVLTVVATYAVHWPSDWSSVGE
LLQGYAITNDGFGNYKLPLIYLVMLVPLMLNGGGRLSVDRLIAWWSSPASPTNADATAWG
AVLLGIGAAVSLLLPVAGGALALVGAALLAWNRARGDSGRELVNA