Protein Info for ABIE51_RS02290 in Lysobacter sp. OAE881

Annotation: PH domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 501 transmembrane" amino acids 28 to 51 (24 residues), see Phobius details amino acids 57 to 76 (20 residues), see Phobius details amino acids 190 to 209 (20 residues), see Phobius details amino acids 234 to 259 (26 residues), see Phobius details amino acids 365 to 383 (19 residues), see Phobius details amino acids 389 to 405 (17 residues), see Phobius details PF03703: bPH_2" amino acids 74 to 151 (78 residues), 68.6 bits, see alignment E=2.2e-23 amino acids 270 to 316 (47 residues), 23.6 bits, see alignment 2.4e-09 amino acids 410 to 489 (80 residues), 46.3 bits, see alignment E=2e-16

Best Hits

KEGG orthology group: K08981, putative membrane protein (inferred from 56% identity to psu:Psesu_2888)

Predicted SEED Role

"Possibly related to ydbT" in subsystem Experimental tye

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (501 amino acids)

>ABIE51_RS02290 PH domain-containing protein (Lysobacter sp. OAE881)
MTTPDGPSPDAAPDATVAAERRLHPMSWLFVLVQQLKQFVLPLVALLVFGRGDRNELWPL
IGVAVLVVLSLWQYFTYRYGVAGDRLVVRSGLFERSLRVIPFARIHNVALQQSALHRVFG
VAEVRLESAGGSKPEAQMRVLKLEDALALEALVRHRGATAATSANEPESTTLLALPFGEI
VRLGLVSNRGLVVVAAAFAAIVQISQRAVMDTFRSVGKWLFGFAGEHHFGLGQYVVSALA
LVLFAILVLRGFSILFALLQYHGFRLSEIGRRLTVERGLLARWRTSASRRRIQAWTLTEG
TLHRLLKRRSLDVDTAVAEEHQQQRALRELAPIATPAACDALIAHLLPRAGWTQLDWRAL
PTSNWWRLVLPTIPVVIAITIAASWRFGTWGLLALAWLPWAAFAAHRRARRMAYAANAEI
IAVREGWWTRHWRFAELDKLQALQLTRSPLDRRCGTATLHLDTSGAGALSPPLRVRFLPH
EDALALYASLSRMLARRPLRW