Protein Info for ABCV34_RS10685 in Castellaniella sp019104865 MT123

Annotation: TlpA disulfide reductase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 164 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF00578: AhpC-TSA" amino acids 39 to 144 (106 residues), 49.6 bits, see alignment E=7.6e-17 PF08534: Redoxin" amino acids 40 to 153 (114 residues), 44.9 bits, see alignment E=2.2e-15 PF13905: Thioredoxin_8" amino acids 52 to 143 (92 residues), 30.6 bits, see alignment E=7.2e-11

Best Hits

KEGG orthology group: None (inferred from 47% identity to put:PT7_3510)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (164 amino acids)

>ABCV34_RS10685 TlpA disulfide reductase family protein (Castellaniella sp019104865 MT123)
MDRRTFLRVAALAGVIIGPDRALASMLPANPVFGRSFDNLQGASQPLSGYVGRPVLMNFW
ASWCAPCVREMPLLESLHHQHPDLVVLGLAIDTRANILRFLDRIKVSYPLLLTGTQGIPL
MRDLGNKGGGLPFSVLFDRQGRVDSTVIGELKPDDVQQRLTRIL