Protein Info for DvMF_2636 in Desulfovibrio vulgaris Miyazaki F

Annotation: hypothetical protein (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 289 transmembrane" amino acids 27 to 45 (19 residues), see Phobius details amino acids 66 to 88 (23 residues), see Phobius details amino acids 100 to 112 (13 residues), see Phobius details amino acids 131 to 152 (22 residues), see Phobius details amino acids 175 to 196 (22 residues), see Phobius details amino acids 209 to 228 (20 residues), see Phobius details amino acids 234 to 235 (2 residues), see Phobius details amino acids 238 to 253 (16 residues), see Phobius details amino acids 256 to 279 (24 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvm:DvMF_2636)

Predicted SEED Role

"membrane protein, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B8DIR4 at UniProt or InterPro

Protein Sequence (289 amino acids)

>DvMF_2636 hypothetical protein (RefSeq) (Desulfovibrio vulgaris Miyazaki F)
MFRLEPLTNLFDLLHHYWEHPRTQRRVALGLIFAFIGGIIAIELNRRGLLAGLPLELTRF
VPSNHFQAVNFAFTMLLVLEVMSLILVLSCSLSRSVGKQFEILALILLRNSFKELSHMHE
PISLSLDLQPVLHIIVSASAALVIFLCLGLYYKVQRPQGYITSAMDRMHYVMAKKLLALG
LFVAFIGIALWDGWMFATTGQSFDFFETIYTVLIFADILMVLVAQTFMPSFHAVFRNSGY
VIATLLMRIALGAPPFWDAAVGIISALFALALTWAIRVFPPNSVSSSCS