Protein Info for DvMF_2530 in Desulfovibrio vulgaris Miyazaki F

Annotation: hypothetical protein (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 381 transmembrane" amino acids 24 to 51 (28 residues), see Phobius details amino acids 78 to 97 (20 residues), see Phobius details amino acids 109 to 129 (21 residues), see Phobius details amino acids 141 to 160 (20 residues), see Phobius details amino acids 193 to 211 (19 residues), see Phobius details amino acids 243 to 262 (20 residues), see Phobius details amino acids 273 to 293 (21 residues), see Phobius details amino acids 300 to 321 (22 residues), see Phobius details amino acids 352 to 373 (22 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvm:DvMF_2530)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B8DQZ1 at UniProt or InterPro

Protein Sequence (381 amino acids)

>DvMF_2530 hypothetical protein (RefSeq) (Desulfovibrio vulgaris Miyazaki F)
MTPALPLAALVPVPDPIPGPWGWFQALLLLTFVVHLLFMNVVLGTGVITLFRSLRTPFSP
NDQINVDIRETAAWVPRAMALAVNFGVPPLLFLQVLYGQFIYPSSILMAVWWLGIVGFVM
MAYYGFYLYGLGHAVLGPRRTLVAGISVALLLVNAFVLTNNATLMLDPARWTGYAASPGG
TLLNWGEPSLVPRYLHMVVGAVAVGGLFIAGRARLLKKTGGPVASGPHGPQDWELRITEG
LKWFTHATYAQFVLGTWFLLSLPGPMTRLFMGGHGLATGAFVLGLAGTVLALVAARQRRV
WLATGATVGVIFLMAAMRAVLRDAWLAPHLNASMAQAAATPVVPPMVGQDGAAALFVVSL
VAGIAAVWWLVVIARRSGKEA