Protein Info for DvMF_2452 in Desulfovibrio vulgaris Miyazaki F

Annotation: multi-sensor hybrid histidine kinase (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1177 transmembrane" amino acids 17 to 37 (21 residues), see Phobius details amino acids 162 to 181 (20 residues), see Phobius details PF00672: HAMP" amino acids 180 to 231 (52 residues), 35.7 bits, see alignment (E = 2.2e-12) PF00512: HisKA" amino acids 268 to 333 (66 residues), 62.2 bits, see alignment 9.6e-21 PF02518: HATPase_c" amino acids 447 to 521 (75 residues), 69.9 bits, see alignment 6.3e-23 PF00072: Response_reg" amino acids 894 to 973 (80 residues), 47.1 bits, see alignment 6.3e-16 PF01627: Hpt" amino acids 1075 to 1139 (65 residues), 25.3 bits, see alignment 3.8e-09

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvm:DvMF_2452)

Predicted SEED Role

"multi-sensor hybrid histidine kinase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B8DMV3 at UniProt or InterPro

Protein Sequence (1177 amino acids)

>DvMF_2452 multi-sensor hybrid histidine kinase (RefSeq) (Desulfovibrio vulgaris Miyazaki F)
MPQKAPRHLLTGIQTRLGLLITLVTTVMLVVFMVMDYTAASGKLHRDIGDFARRQAVRVA
RQLQVPAWNLDAASISSVIAAEMEDQRVYAVALFERDGTTLLGGMQRDGNWRPVPWSGAT
GGDFVTEREVLAHQGEELGSVVVMVSPRGIHDALSAMVRENAVRVTLVGFVLVVLIILIL
RRTVVVPVAGLAQVARKVAEERNYALRAARHGHDEIGRLVDAFNTMLEQVERHERQLTVQ
QGELERMVHERTTALDTAQARVERASRAKSEFLAGVTHELRTPMNAVIGMVDITLGTDLA
PKQREYLNLVRSSARSLLGVVNGVLDFSKLEAGRLALEAIPFRTRDLLEEVTDLFHDRLA
IKDIELVVDIDTGVPPVLVGDPLRLRQVLVNLAANAFKFTERGEVVIRVGRADTEANAGA
GAENIPEAPADGTTDSPQTGGAHGNGVELAFSVRDTGIGIAPEARERLFESYSQADVSVS
RRFGGTGLGLSIVRALVHLMGGDVGVDSEPGRGSTFRFTARFGLPQEQEAPAPPPPQLAG
RQALVAEANPACARVLARLLAQLGVRCQVAPDVAALRTALHHGPTPVTALEHVTDPMDTR
SAVHAEQAPRTGQHARPTPGAWDFVLCGLYLPVIGATNAGAPNAAATERAGEPGDIPSAC
AASTILMHLREEGVAVPPLLVAAAMGREPDAETAARLGVLAVLIKPVKLSALREAALRAV
SPAAEQCAGTDTHGAKPAAGQAAATAWISNAEAATGHAPSGWSAPVQPDQVQPSQIRPDQ
VLRDQARPDSSRPDPVGPDPAQPVPDLRGTRVLLVDDNPINRAVATEMLHAAGVEVEAVP
SGETALDTLARSVRPAYGPSEHGEPGEPDRPDGPDGPDGPDRPDGAIVRKTDTQNVAFDA
VLLDIQMPGMDGYQTAAAIRARNASGGLRLRPGAPVIAFTARVEGEDEEALHRAGIVGRL
PKPVDRQELLATLHRHLPAGPVANAAESQAETDPTDAGPARPAQAPSRPQAGNGKPPTGH
RPAPEDLPASLPGLDVTSGVRRMNGKAWLYLRVLGSFVNTYSGAGEEMRGLVAAAKPDVM
GPDVIGPDAAAWRALSERAHAMAGAAGSISAHEVHDAARALERVGLLLAGDLPPDGENEG
DAASAPHASVHDLVERFDTAVRTTCRSIHTLLDTHGS