Protein Info for DvMF_2197 in Desulfovibrio vulgaris Miyazaki F

Annotation: protein of unknown function DUF805 (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 346 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details transmembrane" amino acids 99 to 117 (19 residues), see Phobius details amino acids 264 to 281 (18 residues), see Phobius details amino acids 287 to 306 (20 residues), see Phobius details amino acids 317 to 335 (19 residues), see Phobius details PF05656: DUF805" amino acids 256 to 344 (89 residues), 72.6 bits, see alignment E=1.7e-24

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvm:DvMF_2197)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B8DQM1 at UniProt or InterPro

Protein Sequence (346 amino acids)

>DvMF_2197 protein of unknown function DUF805 (RefSeq) (Desulfovibrio vulgaris Miyazaki F)
MAVLFSLCALCLLIWLVFFRKRAASDQEIMSVVVALRARLLPLTETEGDTASNLVHHDLS
RYRSGTVALAQPLPPLDILDFFDQTGTIDLARDALRDMHMGKLLNLLLFYALARGRIKGV
RAFGKDRALFDLLARHGLLTPDNHTLIHDKVIRTAVFSFFHPRGDRRYLIPWIAQHHAED
FHQALNLRNAEVLAAIIERFDARPLLPMDEFERKEARRTYDWRILYNLPPERLRNGKPTG
FWLLALEPLRLFNMGHGRARRKEYWGFTLITILCSVATGVADALLQLHMSSFISILWLVP
GIGVGFRRMHDIGRSEFWVLVPVVNLIMACIPGLPEANMYGPNPKA