Protein Info for DvMF_1760 in Desulfovibrio vulgaris Miyazaki F

Annotation: hypothetical protein (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1220 PF13086: AAA_11" amino acids 909 to 969 (61 residues), 33 bits, see alignment 8.5e-12 PF13087: AAA_12" amino acids 1048 to 1198 (151 residues), 42.5 bits, see alignment E=8.5e-15

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvm:DvMF_1760)

Predicted SEED Role

"FIG01224737: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B8DM61 at UniProt or InterPro

Protein Sequence (1220 amino acids)

>DvMF_1760 hypothetical protein (RefSeq) (Desulfovibrio vulgaris Miyazaki F)
MSKKPNRPYFSASIEHLENLYATQGTNVSVLRAIAQELSHRQTVRAAALNANVTRDMKNN
VPARPDAKSSAASDTPANTFPSTTQAGTPATSTRITVHDSTAAAHHVGESPTTPAALSAS
SAPPPTPEASPFLAPDKMPPPSRILAAWTALEALSPQAFKKPEDLVNGDPACIAQLDRGL
PWIPPGEKARPKTQLHYQVVLGSISMAKATDAMVAAFGENDEQPSRQGGIAAIATLLVDR
HGILLAENCIGLSSFAWALPLALQQRLDVLGTWACVERQTAEALEKMLRKTDEDGTPLPL
THDDIMAAFGWLTQRFAIPGDMTIPPTFAVRVYHYYKAQNPPEPLLLNSFFLHDLGRCLG
QSQQDDLPKGLRRYLGVEAPQSPPDLLTDTAALEQAISPAMMPPARWPSPGGHPLVTLQQ
AAVNLSRKELGPNGGILAVNGPPGTGKTTLLRDVVAACVFDRAVVMAGFDNPVSAFTPSG
EKIAFGGGAFYHIYRVDSRLKGHEILVASSNNKAVENISRELPALSAVGRSPDELRYFKT
TSDRLQQGSAGGNPWDGDGSPAATDVAAPVETWGLIAAVLGNRANCAAFQKAFWWDKDCG
LAGYLKTAAGKPQQIPVLDPKTGNETGQRPPRIVEEERPPTPQLALAQWKACKARFLALK
GDVESELASLEQVRQCCLRIPAVRAKHAQLREAHAQFAAQHEQAAAVRDACIADADAARQ
THERQASVAQHHRLTRPGFFSRLFRTARWKQWAADNEALLDAVAMALVAVRDTEQARTQA
VAALNTLADQLRSGEFALDALARELSELERQVASWRSTLGESMVDEHFFRADHSAINLAA
PWIPASLHKKREDLFIAALDVHRAFIDVSAQKLLHNIGVLTGFMSGPVQDPEKRALLGDL
WSSLFMVVPVVSSTFASVERMLCDLPPESLGWLLIDEAGQATPQAAAGAIMRARRTIVVG
DPMQVPPVVTLPQRLVESVCRHFRVDPLQWAAPEASAQILADRASNFQAAFAADPEPRRV
GVPLLVHRRCQNPMFGISNRIAYDGQMVHAPAPCRPCAVADTLGSSYWLDISSPSSAKWS
AAEGDMAYGLLQRLADAGITAPDAFIITPFRNVSSGLRRAARERNALFTALRADPKEWAE
RRIGTIHTFQGREADTVIFVLGAPGTAEIGARMWAGNAPNILNVAVSRAKRNLYVIGSYD
AWSRIGHFAALADALPRVRT