Protein Info for DvMF_1495 in Desulfovibrio vulgaris Miyazaki F

Annotation: von Willebrand factor type A (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 200 400 600 800 1000 1200 1400 1600 1800 2000 2200 2478 PF00092: VWA" amino acids 1713 to 1838 (126 residues), 24.9 bits, see alignment 3.2e-09 PF13519: VWA_2" amino acids 1714 to 1833 (120 residues), 46.1 bits, see alignment 1e-15 PF00353: HemolysinCabind" amino acids 2302 to 2336 (35 residues), 33.4 bits, see alignment (E = 5.4e-12) amino acids 2328 to 2363 (36 residues), 40 bits, see alignment (E = 4.5e-14) amino acids 2337 to 2371 (35 residues), 28.4 bits, see alignment (E = 2e-10)

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvm:DvMF_1495)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B8DLR7 at UniProt or InterPro

Protein Sequence (2478 amino acids)

>DvMF_1495 von Willebrand factor type A (RefSeq) (Desulfovibrio vulgaris Miyazaki F)
MVTQNTTTGAAAAARHIQLTQPQANQQVVIDNIAGAALDMGFPSEAAQLEQSGQDLVFLF
ENGGRIVLSNFFGLFDSHQLPAFNLEDGQSLPGDAFLAALREDLLPAAGPGAGAAAGSGG
VGDYADDAGNLIGGVDRLDPLGTTTFGVQALPGIEDAGTLDLATGTLLVSLTTGISTTIG
ENGNYPEHPDAVPPGTYVGVFEDWEPNQHLGSHMAFQAAFGFTFTPDDNEVLNTITFTGP
ITGHLLVNGVEVLPDGAGNYVIAAADLGNVSLLPNADSGTDIPLSGFATITDPDSGLTGT
VPFTFTAVVDAVADQPIGLHETVTYGPFHCEPGGNGEYGGDVRLLGVSEGPDGFHPPFPG
HFNPHDAPDGFWHKTAADPTNVEAGDHTQSAVHITLSATFGDYQDGSERHYLIIEAKEGW
TYDTVKIGGVELSLSEFLTQGSDIPASATQGSGVIDPNGHYYVIPVGDESIVSTSSTVDG
QGLTHELATKAVTLTLYAPDEHYESGGNGEYPVPTIAMTEQGGDGQHCGPSGNDYHTQFV
TGALAVDSDTDGSLTLINDNSLVLGSTTVWVAAADGTFHVTGQQIGYEDPQAYVNEPWYD
PFSTKDIDLNFQFKGADDEMLDQIRIMVDPSTPAKVLIYGHEATFVSDGEGGGYYVVPSY
LKDHVTLMPAKDSDVDVKLTVTAVFHDPDSGDVAMKTVNHTVFIDAVADKPVDLDSDAHY
IPGPSAADPHGTMGVTLSATFGDVLDGSEKHYLGIEMKSGWTYESGGEVRWINGVKYMVY
EVDPSDAGNAAKNLVIGVPDTDDRYTTTFKTIAIADEVNTNGVEWNSLNNEAYITDTLRV
TVDGADGCLRVSGSGYEDWMKNAHTGDDGITKTHLDVNFSPADSIMDGREVLDEVVVKFA
GKAFTLVVGEGAGAHEYVIDGTAGHTQVTVGATDVDHLYIKAPHDSAVDIPVTVTANFHD
PSSGDLGTTTANATITIDAVADKPTDLHEAVNYGVGHDAADPGNSLSVSVTATFGDVLDG
SERHYLGIEMKSGWDYPSGGSSQYINGTWYKVYEVTSGDDSGTVTKNLSLGVPNTDGHYD
TTFKTIAIATDSEGGSSLTSSNNTAYTYGTVDVKVDGADGCLNVSSGNGGFEDWMPNAHT
GDMTVMKTALNIGFTPDENEVVDSLVIKYDGRPFTLVVGDGAGAHEYVLDGTSGHTSVTL
TGTDLAQHLYVKTSTNSDKDIPLEVTANYHDPNSGDLGSATVDHTVKIDAVADKPTVTVD
VNDSGDGGSSFQTGEAGTVHVTASFPDTDGSENHTVVLNVPDGFTVSNLQGGTWNASAHT
VTWNVGSGGSFDKTITVTHNGAADGSHGFTATATAQEVGTSSSGAENYNYNNTASTTATD
AADVNSGAAIHWSITDAANVSNVVQEGDLGVNGPPLAFTVGYSGYALQPGETASIQLTGP
AAGSTADLADFTNANNEFAAALQAAVGAVSGVTYDATTHTLTFSYGAPTSLTFFAKVFGD
TVIESDEKLVLTIQDPHFNGHVGGTVVDGIEDGFIIDDDKPIIVPPTGGGEIGLSVQDAD
AAGSGLTDVDTDHANLDFTAGSLPMTFSFDIAAGHEPHVTGLSTTTPISWAVDGGTGNLI
GSIDGHPAIILTLTPDSGSHAVGETVHVNVEVTLVDPLLHADGSTDVVVSGIHVSGTDGV
SPAVSGTVSVNVDDASPTAVNDVHDYQGGITSNVVVMLDVSGSMNDDANGNAPGTDSRLT
MAIDAINQLLHAYDDLGAVNVKLVWFDDSAQTHTGWLMGTTAVQQALTILEGNLNGGGAT
NYDAAINLVMSQLGTTGTPPADKTVAYFLSDGEPNRPDGSEGISGSEQTTWETFLAANNF
DMVYALGIGTGISGNTGELNPIGWESGTTSNADVVTIITDMSQLADYLVSTVPTTGNLLT
NDSGGADGGKALYSITVDGVTHYIGESDADHKLALDLHDGKGTLTVDFDDGSYVFSPGAT
PTGTEVIGYDIKDADGTHSNATLTLNLFGSELDAHDNHVSTAASSSTVVGNFSSASDWDG
WSHSGNVSIESGELKLVLNSSGSGSSSVETSQSFTGVAAGDKLTFDWRAVPTGNTSNHDS
DYVEVVINRSGGSSGDATVAVYTVPANGSASGEQHFSYQFTQSGNYSVTIRAADGSSSGG
SGSNGGLNLFIDDVALISAAAAIMGNVVTDASATEYVDQIGGHTALVTEVNGHALAQDGS
FSDFTTDYGTLHINAFGEYTYTPKAGVDGHDDNFVYKLASTEAGDTSHDYATLSVHLGTA
ASAAPVSTAAHSMSGTEHFYQGDENHNTINGTSGDDVIFGHGGNDIIHGNAGHDYLHGGA
GNDFLYGEGGNDILVGGQGGDTLTGGTGADTFVWNAEDFTSGATDVVTDFKPGASGENDV
LRFADVLLDHDGNSANGISTSLIASGDLTQVGSSNDVQLTLHHGGAMQHVTLQGALEHNT
LAEIEQHILTNKIITEHS