Protein Info for Shewana3_3313 in Shewanella sp. ANA-3

Annotation: hypothetical protein (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 474 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details transmembrane" amino acids 211 to 234 (24 residues), see Phobius details amino acids 246 to 269 (24 residues), see Phobius details amino acids 281 to 300 (20 residues), see Phobius details amino acids 334 to 360 (27 residues), see Phobius details amino acids 380 to 404 (25 residues), see Phobius details amino acids 416 to 434 (19 residues), see Phobius details amino acids 440 to 462 (23 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to shn:Shewana3_3313)

Predicted SEED Role

"FIG01058711: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0L0G8 at UniProt or InterPro

Protein Sequence (474 amino acids)

>Shewana3_3313 hypothetical protein (RefSeq) (Shewanella sp. ANA-3)
MTKYLTKFALLCSLALAMLSTPSWAEETHNPDQTWHYVNAQGELKIKLYFFWSKTCPHCA
EAHPFIDSLPQKYPWIELESHMVSAPGVQDIWQNIASQTTTEARSVPYMASCEKAIVGYS
SEAVTGEFLVNRLKNCYLSLGGQLSEADMPTTGTTAAAPTNSEPLFGTCGTDSGEGTCDA
TSLASNDQAEVQPVELPLVGVVTPETMSLPLLTLVLAGVDAFNPCAFFVLLFLLSIMVNA
KSRSRMLLVGGIFVFFSGFIYFLFMTAWLNIFQLLGAGSDGGMIILAAGILALIAGTINV
KDYFFTKGDVTLSMSAENRTSLIKRMGKLSNSSSLGALIVGSTVLAILANAYELLCTAGF
PMIYTSVLSMHNLPDIERYMYLVLYNIVYVIPLAIIVIVFSATLGKRKLTEKEGQALKLM
SGVMMFGMGVALVLDPTALQSVGLALGLILGSLGLTAIIVLSRKLLTAKANKTA