Protein Info for Shewana3_2763 in Shewanella sp. ANA-3

Annotation: peptidase S9 prolyl oligopeptidase (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 677 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF20434: BD-FAE" amino acids 431 to 616 (186 residues), 40 bits, see alignment E=4.9e-14 PF00326: Peptidase_S9" amino acids 451 to 656 (206 residues), 143.2 bits, see alignment E=1.3e-45

Best Hits

KEGG orthology group: None (inferred from 100% identity to shn:Shewana3_2763)

Predicted SEED Role

"prolyl oligopeptidase family protein" in subsystem Synechocystis experimental

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0KYX1 at UniProt or InterPro

Protein Sequence (677 amino acids)

>Shewana3_2763 peptidase S9 prolyl oligopeptidase (RefSeq) (Shewanella sp. ANA-3)
MGLGRYLPYLLSAVLLLGGCERTDTHYLPAKENGDIKVAPYGSWQSPLSAAEVFEQADDI
AELQSVGDAIYFAESSGSAQGKVGIKRLDGLGKVTEVVPPDFNVRSTVHEYGGAAFLGIG
QSLFATKLQDQLFYRFAPNQPPLPLTPNGTRHADCVAYPKGSRIICVREDHRQGGEPKAS
LVTINLNFAGEGDTFVTGHDFIASPTISPDNTQLAWITWEHPYMPWDNSVLWLGDLDRKG
QLKNIRQVNTPKDSSVTQPLFGPDGNLYVVSDLSNWWNIYRVTPQQTLVSVLSKNAEFAV
PDWRLGNHNYAFENASTLIASYVEGNRAALLRMHLDTGLTESLAVDFAEITQVVKGEDGV
YFVGAKATPEKGIYRVVGRGTELVYAPALPNLDPNYVSRAKNIAFATGKNQQAYGYFYSP
VNPNYIAPHDTRPPLIVMLHGGPTARASLAYRSEIQFWTSRGFAVLDLNFRGSSGFGRAY
RQSLYGKWGESDVEDAVNAAKYLVAKGWVDANKLAIRGISAGGLTVMSSLAFYDVFQAGV
SYEGISDFEQLAKGTHKFESGYLDQLIGPYPEMKQRYRELSPLNHLDGLNEPLLIFQGLR
NKIVPTAQSRQIYEALKAKGVPTAYIDYGDDSDEGRTPEHKAAGLETELAFYGQVFHFTP
AGKLPTFGFDNVMALKH