Protein Info for Shewana3_1943 in Shewanella sp. ANA-3

Annotation: protein-glutamate O-methyltransferase (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 740 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF12118: SprA-related" amino acids 280 to 561 (282 residues), 316.3 bits, see alignment E=1.4e-98

Best Hits

KEGG orthology group: None (inferred from 100% identity to shn:Shewana3_1943)

Predicted SEED Role

"SrpA-related protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0KWK5 at UniProt or InterPro

Protein Sequence (740 amino acids)

>Shewana3_1943 protein-glutamate O-methyltransferase (RefSeq) (Shewanella sp. ANA-3)
MSVMALSSQIGAPSTSFLGADKSIEPSKGGKPQSGQTYQGGNGQAVATLSASTVNLNTPK
FEASGALAPSLSSLGAAMNQAVPMSRTTPALLTDVKPASAPISSHVDIAPVQKAFTALGG
NATAQLNSKQLHSNKPPSQALQSNQPHSAPLDTSLLASSSSSFSLLTGPRSIGGMREGQI
ATVDTQPSVSTLTASDVGFSTTSDAITPFAPPAPSLAATIATPDGSVVSASLGLANIFST
STPVGTNIGPTESNGILPNASSAVVTPFTTEFVGVDAIGKASDSSASASFNPNALQESNQ
SSGVSEQLSRVFNEPSGESGQVGAGITPNAQTQQQQTQTEQIQAQNARDEQAKQARTQAV
QEQEQKQQALAEVFAKADQSKQAQQAQDEQTRQQDLAKEQVKQAQEKAIEQQKAQVDALK
SRDTEVKAHEHAHASVGGQYAQSPSFKYEKGADGQRYATDGEVQIDVSIVPGDPLATINK
MKQVYAAAMAPVDPSSADIRVAAEALQKMNEAKAKLAEERQQQIVDQPTTETLIGAEAQI
DGLPPLKERQIQVTGKIDANGNITAPQDEPSAPVTEVIDKIKQAIAAQVASSNTSDAVST
TEVDTTETIEPPTATLAIGAVPNKDEAPEVAMQRLASSRDNKSGLSHTTNGSNAVRFYGS
VAVATLASKGSSELNQSGSDEASLERIDDSALTTHSPSDEGNSVISHGLALESSSRQNTR
GLFNPQTLALHRPRFLDVNV