Protein Info for Shewana3_1740 in Shewanella sp. ANA-3

Annotation: peptidase S8 and S53, subtilisin, kexin, sedolisin (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1261 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details PF00082: Peptidase_S8" amino acids 225 to 480 (256 residues), 185.8 bits, see alignment E=1.1e-58 PF02225: PA" amino acids 805 to 885 (81 residues), 35.3 bits, see alignment 1e-12

Best Hits

KEGG orthology group: None (inferred from 100% identity to shn:Shewana3_1740)

Predicted SEED Role

"Probable secreted peptidase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0KW04 at UniProt or InterPro

Protein Sequence (1261 amino acids)

>Shewana3_1740 peptidase S8 and S53, subtilisin, kexin, sedolisin (RefSeq) (Shewanella sp. ANA-3)
MKQLFKRSRIAATCLMAMGLATSYATLADDSAFVDAQSGAVQFTLITGEVVTAVVRADGS
LGGIRLLGEHGAEVITSIFQNANGQYLITPKAQPLVTSQAVDLELFNITKLHAAGYDDAS
TDKLPVIIEYQDGTLAGSAVPNPIEGATLTDEIELIDSAAFGVSKSKAAKVWETLSTDAS
VKSVWLDAVVHADKEVPNGVNALANLTPTVPLTGTYGNLAKHFNGQGVTVAVLDTGYDLD
HNDLAEQVLVSKDFTYSSNGIDDLNGHGTHTAATIAGTGVESNGRWAGMAPGAKLLVGKV
LTNAGSGSTSGILSGMQWAVAQGADVVSMSLGGSGTSCTGPLVDMVEALSDKALFVVSAG
NSFTRETVGIPGCAPSALTVGAVDRDNHTASFSSRGPSPDGHSAKPDIASQGVDVVSAAS
GGFGSTAYRALSGTSMSAPHVSGGAAIVMQARPELSPRQVKEVLTSSVLPNDSHVLEQGA
GPMDVNRAIAQSIIAPPNMELGSFAYDQDIGVTEKTISLRNLSDKDINLKLKMSLIGEDG
KTRMPATLAGLSLNSITVPAKGSAEIPVWIDSSVALRSGAYGTITGRIEGTTTGKSDERV
TVPVSFWIEPPQVNLSLSVTDMRGHPATSPSKVYLMNEEDDWGQAVSLTNGQASVKVPEG
NYSIVANVMTYDNDFTSNGLVESATQMAVLNRKLSQDTHLEFDARNAEKLQFKASKPLAT
QGFSFGFTYALDDNKLAKLAAMDFAPDYVKDMYTWSQGHDDRFRSFVTTRAIAPEAVLTM
QNGEVLEYNKQGLAMSFNGQGRAEVVFVGDGGYSTDWTQFDLKGRIALIGNPYYLTSTMV
NNALKNGAIGVIFYRPGLKGRYKGTIGGTPRIPAVGISSDQGEALLAQVEAGNNLVSWSG
IAAERTPYAYSINHITDGRIDGGQVVLQEHKMQKISAAYHSQNDERPVFVDVMGMTNSTG
EFYSTGSTQMVMTPIIRDEYYTATRKNMWTNIVMPGSAMTAEGAYFDGPRMMTEGTVEST
SWLKGPKAGSLLTNGGAIAYRDTNTIDLSIVRFGDAAGHDGKGGYNSQSLYGLKVNGQNT
YLDSGLLTLPDSNAQVELEIRSYARGVGSSSPIKDNLGSFYQGIYHFSTDSSKQGVQAVL
VPKIDIPIALDNTVAAGEAVTVKLAGVMDGIGQVDLADVSLEYGYGQECSLAAVSVSIYC
PVASKFAESAWKTAEVKMVDGQWVATIPNDTAAGNFVHLRVQMNDGSSTAQQTMMRVYML
K