Protein Info for Shewana3_0931 in Shewanella sp. ANA-3

Annotation: hypothetical protein (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1048 transmembrane" amino acids 184 to 205 (22 residues), see Phobius details amino acids 217 to 236 (20 residues), see Phobius details amino acids 246 to 265 (20 residues), see Phobius details amino acids 271 to 291 (21 residues), see Phobius details amino acids 299 to 316 (18 residues), see Phobius details amino acids 322 to 339 (18 residues), see Phobius details amino acids 347 to 367 (21 residues), see Phobius details amino acids 373 to 397 (25 residues), see Phobius details amino acids 406 to 425 (20 residues), see Phobius details amino acids 431 to 448 (18 residues), see Phobius details amino acids 460 to 476 (17 residues), see Phobius details amino acids 482 to 499 (18 residues), see Phobius details amino acids 511 to 533 (23 residues), see Phobius details amino acids 539 to 560 (22 residues), see Phobius details amino acids 581 to 599 (19 residues), see Phobius details amino acids 605 to 622 (18 residues), see Phobius details amino acids 633 to 655 (23 residues), see Phobius details amino acids 662 to 681 (20 residues), see Phobius details amino acids 693 to 711 (19 residues), see Phobius details amino acids 717 to 739 (23 residues), see Phobius details amino acids 749 to 765 (17 residues), see Phobius details amino acids 771 to 788 (18 residues), see Phobius details amino acids 800 to 820 (21 residues), see Phobius details amino acids 826 to 844 (19 residues), see Phobius details amino acids 873 to 892 (20 residues), see Phobius details amino acids 903 to 921 (19 residues), see Phobius details amino acids 940 to 957 (18 residues), see Phobius details amino acids 963 to 983 (21 residues), see Phobius details amino acids 991 to 1013 (23 residues), see Phobius details amino acids 1019 to 1036 (18 residues), see Phobius details PF10101: DUF2339" amino acids 189 to 1038 (850 residues), 92.4 bits, see alignment E=1.5e-30

Best Hits

KEGG orthology group: None (inferred from 100% identity to shn:Shewana3_0931)

Predicted SEED Role

"FIG01056863: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0KTP7 at UniProt or InterPro

Protein Sequence (1048 amino acids)

>Shewana3_0931 hypothetical protein (RefSeq) (Shewanella sp. ANA-3)
MPLKDDVDQLKAELAQLKLQHLSQQSSLSRQLAEFSAKLDSISLQLEQQDNATLTTASTC
TDDITTPFGTTIEPRDGRASLQTEEMAPHIQPQAPEANPWQDDPWQRHAKAPSKAVHSPV
DSQQDDLQQDKAFSQQAGLEVGVQATSQLGTILSQSVAAIMAPFAAITEQVKGFYQHYQA
KGLGPVFLMTVAGIITLTLGFGYLLQYSINHWFSELGKALLGFGCANAIIAGGIFIRQKR
AGMADFGSGVVGLGLILNYLCAYFIGPYFEIIPNSASFILLLLITLAGYGLSMRLDAKVI
AVIALVGGSMAPMMLLSQSYAPLLYIPYLLLIGAGALAQSRKLHWPLLLEITAFLHIACI
EAFSYFIDLPLTQWGGAAVLALVSINALFYLYGLFGFMVNPSTTSLSHRALVLPIALLAF
VIFELTQFTPFAGEIFIANALICAGLYVKLKSRLAPSQRSLLLVFGGSFAAFAALYLLSH
DFLGLVLILEALLLLWIGLKEKLISVRAEAYVLLLTGLVLNLYAVLTGFSLLGLGEQTMM
AALGFPLLALALSAAALLFVIRQVGNDELPLSRLERQLSYLFKEFLSGFYVATLLLAAYL
ISSDYYLAIIPLVSLLMLYLSGKDKLMVSEFAAWLLLLPLLFSVVEGVTLTGSLSFSAQP
LMAKLARIELFAALLLAHYWYRKHYPSSLFAQAAKQIQLGCYLLLPLILLPKVMRSYWEF
TAVALWLSSLFSLALAYVIKHKALEIETKILTWLAILTTASLCLFEVWQGLIALLIGALA
MGFVLLRYRKLAKPCASLLTLQWQLSPYYFALVLAVLVYGFNRVDVVAWSMTALALSGYF
ALLLQRRTKHGSVQTGLMAHLAIEIQAAVRSSYSLAYGLCLGLVLLPIMLHFELSLRLDL
DNVLLILCELMALALLALLILRRGVAIRLHQRFLPLQWLKWGWHGLLALSYLTWSYAFDN
MIAAPLSAILLVVHGSVLMFISLKPQHGDMIRLAAGLFTLATLKVLLLDMASFELVQKVI
AFMLIGVILLTVSYFYQKARNRLQEANQ