Protein Info for Shewana3_0797 in Shewanella sp. ANA-3

Annotation: protease domain-containing protein (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1393 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details transmembrane" amino acids 1372 to 1389 (18 residues), see Phobius details PF02128: Peptidase_M36" amino acids 335 to 816 (482 residues), 303.7 bits, see alignment E=4.2e-94 PF02225: PA" amino acids 508 to 594 (87 residues), 67.1 bits, see alignment 2.5e-22 TIGR03501: GlyGly-CTERM domain" amino acids 1372 to 1393 (22 residues), 24.1 bits, see alignment (E = 2e-09)

Best Hits

KEGG orthology group: None (inferred from 100% identity to shn:Shewana3_0797)

Predicted SEED Role

"Metalloprotease MEP2"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0KTB6 at UniProt or InterPro

Protein Sequence (1393 amino acids)

>Shewana3_0797 protease domain-containing protein (RefSeq) (Shewanella sp. ANA-3)
MKTKLSIAISAALLSSAAVADNNTLRIHQISNNLAKNQHSQSVTSVSGMKDQYDQETGEA
TFQWAKSDQRTPDMGALDSQYKLAFAADYYLNQVTGLSTSKNASLKPVLTNLHDTGRGAK
IAKYQQEYQGVEVFNRNFNVLMNSNFELVATSGSLLPSSTANTTELKGIKTTFNDPLNAV
KAASKAMGVSDANISASTTSGKFQSFNVTASGNSKILKGEPRSKPVFFELKGSLVPAHYV
EIEVADNDSVDSEFYSFVISDLDNKVLFKHNLTAQEAAFNYRIYADEQGVPWDGPHGNVI
PAMSEDQVDATEYLDAPMVTITTGPISTMDPWLAEDATTTSGNNVFAYVDALAPDGFTNG
DFTAEITSDKTFDYQYNTNQVESSVNNRKASIVNLFYMNNYLHDLFYDHGFDEASGNAQA
QNYGRGGEEGDAIRAEVQDNSGFNNANMSTPADGRSPRMQMYLWDSKDAVNGEDYGVTVT
SDAAIGLLPSTQRASFGQGQFEISGEVVRLVDGVAPVNDGCTTPTNAADLAGKIAIIDRG
VCGFTVKAKFAQTAGAIGVLIANNSGTTEPAPMGGSDDTVKIPSIGLSKNDGALIYAQLD
AAKPVSVTMFNKKPFKDSSWDNAIVAHEWGHYISNRLVGNSSGLINQQGRSMGEGWGDFH
ALLVISEADDALIPGNELFQKPYAAITYVASFYSGIRNYPYSTNMDVNPLTFGNVELNKG
TSADQYGNAEVHDAGEPWAAMLWDCYVSLINDERYTFAEARSMMMSYLVAAYKMTPIAPT
YTEARDALLAAAYANEPKDYELFLKAFARRGMGLGAVSPERYDTKHRGVVESYKTELSTF
NVTNHEINADYEGLTVGYCSKDGILDKGETGTVSFTITNRGSKTFERLEGKVEVVSGQDI
TLANDGKVTFGALDLFAEVTSTPIEMTLNEATTADTVELKLTFPTLEGTDVNEYSFTTVV
NMDFKDKAPEGNKSTSNMESQAGRVDFKEHVLGGGDMAKGTAKLESQYADYFPVDTQYLR
IANNGFASDVAYETKPVTVGYGGDFKISWFQYFEIEENYDGGVVEISVNGGDWADVTQMG
GVFEGAGYTGELADLLPGRQAFTGFMDFPGDIETVNFGTKLNGNEVRFRFRIVSDTNSNE
FGWIIDNVTFTNIVTSVFHEQTAGDVNPCVNRLPNVSLVTSATEVKEGEAVSITAAAIDA
NAGDTLTYTWVQTSGTAATLTGKDTASLSFTAPNVDADEVLEFALTVNDGTDDVVSTVLI
TVKNNNIPVVSLTPSATEVKEGEDVSITAVAIDADSDDILTYSWAQTSGTAVTLTGADTA
SLSFTAPQVSANETLEFTLTVNDGTDDAVSTISVKVNDVPAPTPTPTPTKSSGGSLGWLT
FILLPLAALRRRK