Protein Info for Shewana3_0265 in Shewanella sp. ANA-3

Annotation: hypothetical protein (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR04344: 5-histidylcysteine sulfoxide synthase
  • amino acids 6 to 443 (438 residues), 685.9 bits, E=2.5e-210
• PF12867: DinB_2
  • amino acids 25 to 160 (136 residues), 33.3 bits, E=2.3e-11
• PF03781: FGE-sulfatase
  • amino acids 194 to 443 (250 residues), 94.6 bits, E=3e-30
• TIGR04345: putative 4-mercaptohistidine N1-methyltranferase
  • amino acids 458 to 698 (241 residues), 337.6 bits, E=4.1e-105
• PF13489: Methyltransf_23
  • amino acids 496 to 632 (137 residues), 35.8 bits, E=2.3e-12
• PF08242: Methyltransf_12
  • amino acids 503 to 624 (122 residues), 37.8 bits, E=9.2e-13
• PF08241: Methyltransf_11
  • amino acids 503 to 626 (124 residues), 32.9 bits, E=2.9e-11

Best Hits

KEGG orthology group: None (inferred from 100% identity to shn:Shewana3_0265)

Predicted SEED Role

"Glutamate synthase [NADPH] large chain (EC 1.4.1.13)" in subsystem Ammonia assimilation or Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis (EC 1.4.1.13)

MetaCyc Pathways

• L-citrulline biosynthesis (7/8 steps found)
• L-glutamate and L-glutamine biosynthesis (6/7 steps found)
• ammonia assimilation cycle III (3/3 steps found)
• L-glutamate biosynthesis I (2/2 steps found)
• superpathway of L-citrulline metabolism (9/12 steps found)
• L-glutamine degradation I (1/1 steps found)
• L-glutamine degradation II (1/1 steps found)
• L-asparagine biosynthesis III (tRNA-dependent) (1/4 steps found)
• glutaminyl-tRNA^gln biosynthesis via transamidation (1/4 steps found)

KEGG Metabolic Maps

• Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
• Glutamate metabolism
• Nitrogen metabolism

Isozymes

Compare fitness of predicted isozymes for: 1.4.1.13

Use Curated BLAST to search for 1.4.1.13

Sequence Analysis Tools

See A0KRT9 at UniProt or InterPro

Protein Sequence (699 amino acids)

>Shewana3_0265 hypothetical protein (RefSeq) (Shewanella sp. ANA-3)
MPVLQTLKLTGENEALKRQELKQYFNQTWALYESLFERIKHDEAYYVKAEPLRHPLIFYF
GHTATFYINKLKLGKYLDERVNDHFESMFAIGVDEMSWDDLDETHYQWPSVAEVKTYRDQ
VKQVVNQLIDTMPITLPISQDSPAWVILMGIEHERIHLETSSTIIRQLPLEDVSANAQWP
ECQDVGSAEPNQLLAVAGKKITLGKKEQDNTYGWDNEYGNKSFKVADFKASKYLVSNQEY
LVFVEAGGYQTQDYWNEEGQAWLAYTQAQMPRFWRRRDDKWWQRNLTSEIPLPLNWPVEV
NQLEAKAFCNWKARQSQSNIRLLTEAEWYILRENVPSDAPDWHEVPGNTSLAYYASSCPV
NRFKHNDFYDIVGNVWQWTETAIDGFNGFAVHPLYDDFSTPTFDGKHNLIKGGSWISTGN
EAIAASRYAFRRHFYQHAGFRYVESLQNPEQMAEVNLYETDELISQYLEFHYGAEYFGVP
NFCVNGVQQALNEIQLEHTTKALDIGCSVGRASFELAKVFDHVDGIDFSARFIQQAYALT
EQGEKRYTIRTEGDLQEFKSASLAKLGYLGEAKKVNFIQGDACNLKPIYTGYDLVYASNL
IDRLNDPQHFLTNIGQRINQGGYLVIASPYTWLEDHTPKEKWLGGIKVKGENFTTLDGLT
ETLIGQFELVAVKEIPFVIRETKRKFQHSISEMTIWRKR