Protein Info for Shewana3_0182 in Shewanella sp. ANA-3
Name: murB
Annotation: UDP-N-acetylenolpyruvoylglucosamine reductase (RefSeq)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 100% identical to MURB_SHESA: UDP-N-acetylenolpyruvoylglucosamine reductase (murB) from Shewanella sp. (strain ANA-3)
KEGG orthology group: K00075, UDP-N-acetylmuramate dehydrogenase [EC: 1.1.1.158] (inferred from 100% identity to shn:Shewana3_0182)MetaCyc: 51% identical to UDP-N-acetylenolpyruvoylglucosamine reductase (Escherichia coli K-12 substr. MG1655)
UDPNACETYLMURAMATEDEHYDROG-RXN [EC: 1.3.1.98]
Predicted SEED Role
"UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)" in subsystem Peptidoglycan Biosynthesis or UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis (EC 1.1.1.158)
MetaCyc Pathways
- peptidoglycan biosynthesis I (meso-diaminopimelate containing) (11/12 steps found)
- UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) (8/8 steps found)
- UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) (7/8 steps found)
- UDP-N-acetylmuramoyl-pentapeptide biosynthesis III (meso-diaminopimelate containing) (6/8 steps found)
- peptidoglycan biosynthesis III (mycobacteria) (11/15 steps found)
- peptidoglycan biosynthesis II (staphylococci) (12/17 steps found)
- peptidoglycan biosynthesis IV (Enterococcus faecium) (12/17 steps found)
- peptidoglycan recycling I (9/14 steps found)
- peptidoglycan biosynthesis V (β-lactam resistance) (11/17 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 1.1.1.158 or 1.3.1.98
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0KRK7 at UniProt or InterPro
Protein Sequence (351 amino acids)
>Shewana3_0182 UDP-N-acetylenolpyruvoylglucosamine reductase (RefSeq) (Shewanella sp. ANA-3) MSLLSRQNIIMSFPYSLKPFNTFGVEQSCLSLIEVHSKAELQSACLSLYQSKRPMLVLGG GSNIVFTDDFNGTVVRVLSKGISCSEDDTHFYLAVEAGENWHELVQFSLNQNMPGLENLA LIPGTVGAAPIQNIGAYGVELCDICDWVEYLDLASGNLLRLTVDECEFAYRESIFKGSLR DKAVITAVGLRLPKAWQPKLAYGPLQSFTAETVTPREIFDRVCEVRSEKLPNPEVLGNAG SFFKNPIVSAATYMQLAARFPSIVGYAQPNGEVKLAAGWLIEHAGLKGFALGNAGVHAKQ ALVLVNLGHATGQDICRLALHVITRVNEVFGVKLEAEPRIMGLTGETSLDV