Protein Info for Sama_2337 in Shewanella amazonensis SB2B

Annotation: hypothetical protein (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 826 PF01973: MptE-like" amino acids 173 to 337 (165 residues), 153.8 bits, see alignment E=3.9e-49

Best Hits

KEGG orthology group: None (inferred from 100% identity to saz:Sama_2337)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A1S836 at UniProt or InterPro

Protein Sequence (826 amino acids)

>Sama_2337 hypothetical protein (RefSeq) (Shewanella amazonensis SB2B)
MSIESSVTPIFSVTQFGETYLPSVNRTLFENQPSEKLFEREYPNLFTKENHLYVIVGTDS
GLLANYVLEHKLPKGSRYLFVELESVMALMNIEIPENVKDRVKVHSLATFAEAIEQDPIP
VYFIKKATRTYKSQAAKYAYITEYVSLLSNVEKIMEQQTFVHSETLNQKLFVKRQLENVA
DNLVPAKVLSESFSGKSCIILAGGPSLDESLPWVINHQEELVIFAVSRICRQLCSIGLIP
DIVVSVDPYEASFDVSKEMLTLPESVLFINSNHIEPRLLANWRGPSVYTGSYLPWNSEET
DANISTVGPTVTNAAVKVAASMGFEQILLAGTDLCFSSSGDTHAKGSLEAAAGANMSIIG
DWVDTYNGSKAETSIQMVHAREALEYEVTQLQAGQKIFNLSAQAAMVKGIEHRPTSNIQL
SGPLEKSTVITKLTQPPPRKERIQKISDAKIQLNKAYESLKSIHDASVEALKINTVLKTT
KSSHSDAYYRSLLGRIDKIEQQLSERYSSMYQFIKFFGYAEFTQFLTPTDSSEWQRKDLF
FMSDAYYRAVRSSAEQLIQLISQAQEKVSLRLEELSPNANSGVLFRKWAEYQEFGRAMIW
QKANMGILSGLQLGQIQALNEKFNELIHQKSNYSKRIEKSHSKLDQVERKLLLLQSTHNG
FGLSQLAAILKSRAATDKEAGRLYRLADCFYHQLKGEHSLALGTLLKLDESQLTEREFKE
MASLGLKVQKPEISLLALDKLIEYSDEYYPLYASVLKLTGQYQHAAETYLEYLNKYPGDV
VTWIKFGQFMVEAGERDMAISAFHQAEQADPGNAVAKQYLSELYHQ