Protein Info for BT3275 in Bacteroides thetaiotaomicron VPI-5482

Annotation: conserved hypothetical protein (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 860 PF17162: DUF5118" amino acids 28 to 77 (50 residues), 58.9 bits, see alignment 5e-20 PF17148: DUF5117" amino acids 86 to 281 (196 residues), 177.4 bits, see alignment E=4.2e-56 PF16313: DUF4953" amino acids 415 to 718 (304 residues), 330.2 bits, see alignment E=2e-102

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_3275)

Predicted SEED Role

"FIG00938824: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8A2N0 at UniProt or InterPro

Protein Sequence (860 amino acids)

>BT3275 conserved hypothetical protein (NCBI ptt file) (Bacteroides thetaiotaomicron VPI-5482)
MISPAVAKKKNKKKASTEATTKKEKKETKYDKLFKDKKVTTAKGFITLHKLDNKIYFELP
IKVMNRDILLGSTIVETTDNQFGCVGEKSGDPFLIRFVQRDSTITLRRVQAGQFSEDREI
KKRLVSSTMPAIAETFEIKAYNNDSTAVVFDMTDYLLSDKKNLSPFSPYSMMEMMGADIS
KDFEKESSFIQGVKGFEDNVSIRSLLTYKISVGMKGNYAVKKMPFTAVMNRSFILLPEQP
MRPRYADPRIGIFEHSVVEFASEGRGLRTRHIAHRWNLEPSDSAAYLRGELVEPKKPIVF
YIDDTFPLSWNKYIHKGVEVWQKAFEKIGFKNAIIAKDFPKDDPNFDPENIKYSCIRYAP
STVANAMGPSWIDPRSGEIINASVTVFHNIVQLVQYWRFLQTAPADEEVRDVVLREDLLG
DCIAYVLSHEVGHTLSLMHNMAGSSSIPVESLRDPKFTQEFGTTYSIMDYARNNYIAQPG
DKERGVRLTPPELGAYDYYAIAWLYSPIFEAKTAEEEIPILDKWISEKSGDVKYRYGKQQ
FRRRFDPSSVEEDLGDDPVKASEYGRRNLQYLLKHINDWVADKDKDFEFRTAVYDEIVYA
YVRYLTFVLGDIGGIYLNERYDGDQRPSFKTVSKQQQKKALNFLLNELKDLSWLDARETL
KEFPIRTSVAMQMEDAIIDGILSRCGAVAICSGKATSAPYTQKEYLADIERFVWAPTRAG
RTLTETEMRLQMNYLTKLIEGSVAGVAKNATRKGIADMYAHIEVPEWLKAASRERFGIIS
EEFMGCFNNKPREMQAARLEEISGFDDDVDLKAPIEPMEHIYYGELKKVRSLVAASASTG
SADTQRHYRLLLYKIDQALK