Protein Info for BT2958 in Bacteroides thetaiotaomicron VPI-5482

Annotation: conserved hypothetical protein (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 789 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF15979: Glyco_hydro_115" amino acids 162 to 506 (345 residues), 432.8 bits, see alignment E=1.2e-133 PF17829: GH115_C" amino acids 674 to 780 (107 residues), 46.4 bits, see alignment E=3.9e-16

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_2958)

Predicted SEED Role

"FIG00408376: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8A3J6 at UniProt or InterPro

Protein Sequence (789 amino acids)

>BT2958 conserved hypothetical protein (NCBI ptt file) (Bacteroides thetaiotaomicron VPI-5482)
MRNRILFSFLAWVAVIVSVQGKQKDFVLQSGQPVAIACSGSEAPVVRTSLDLLSRDLQTV
LSATAHIDTNTGNIIVGTIGQSKLIEQAGIDISALKNKKQAFMLAVSEDGKLVVAGSDSH
GTAYGILEISRLLGVSPWEWWADVTPEKKETFRLSGKFRELQSPSVEYRGIFINDEDWGL
MPWSNKTYEPSDVKGEIGPRTNERIFELLLRLRANTYWPAMHECTLPFFLTKGNREAAKK
YGIFMGASHCEPMACNAAGEWKIRGKGAYDYVNNSPAVYQFWEDRVKEVAGQEILYTLGM
RGVHDGKMQGAKTVEEQKAVLDRVFVDQRGLLEKYVNKDVTQVPQVFIPYKEVLDIYHAG
LQVPEDVTLMWCDDNYGYIRHFPTAEERARKGGNGVYYHVSYWGRPHDHLWLSTMSPSLI
YQQMKQAYDQGIQKMWILNVGDIKPAEYQIELFMDMAWNLDKVSSEGVTAHLKHWLEREL
GTSCAKTILSVMQEHYRLAHIRKPEFMGNTREEEKNPVYRVVKDLPWSEREINERLNAYS
ELSETVEKAASKVPAGRQSAYFELVKYPVQAATQMNRKLLYAQLARHDKEDWEKSDAAYD
SIAALTQHYNSLENGKWNRMMDFKPRKLPVFNRVERKAATAPMTADRKAVCQWNAAEAKK
GNAIVCEGLGYESKAAEIKKGDALTFSFGNLKTDSVEVDIRLLPNHPVHGDKLRFTVSLD
GAEPEVIAYETKGRSEEWKENVLRNQAIRKIVLPVTGKKSHQLVIKALDEGVILDQVMLY
EVNRNSSGI