Protein Info for BT1935 in Bacteroides thetaiotaomicron VPI-5482

Annotation: hypothetical protein (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 733 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF13646: HEAT_2" amino acids 477 to 559 (83 residues), 30.6 bits, see alignment E=1.7e-11

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_1935)

Predicted SEED Role

"FIG00404178: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8A6E9 at UniProt or InterPro

Protein Sequence (733 amino acids)

>BT1935 hypothetical protein (NCBI ptt file) (Bacteroides thetaiotaomicron VPI-5482)
MIKKIIYLAFLLPLAGNAQTTVIKPLVKQPTAFAIITDNQTYANTKDAMHQYKTAVEDDG
LATYLISGDWQNPDQVKQIIIKTYQECPSLEGLVLIGDVPVALVRNAQHMTTAFKMNEKA
FPWDQSSVPTDRFYDDLNLKFEFIRQDSVNHQHFYYKLTEDSPQRLNPTFYSARIKYPEK
KEGDKYAAIASYLKKAAAAKADKHNQLDRVFSFNGASYNSDCLIVWMDDEKAYMENFPLA
FGRQMGFKHWNFRMKHPMKYKLFSELQRKDLDLFMFHEHGMPTGQLINDELACTDFNNRY
KMLKSTLYNAVMSHVGKRDKDTLRIQMQEKRQVNEVFFKDLDNPKFWEADSLHYADERIV
TEDLMKRNLSTNPKMIMFDACYNGSFHENDYIAGQYIFNDGQTLVAQGNTRNVLQDRWTI
EMIGLLSHGVRAGQYNKLIASLEGHLFGDPTFRFAPIEANTLSTDITIHKDDKAYWKNLL
NSPYADVQSLAMRMLADADTQKELSPLLLKKYRESGFNTVRMEAIKLLSRYQDDNFIEAL
REGLNDTYEMVARQSAIYAGFVGDDSLLPAIVEALVEHNERLRVQMSANKALSLYPKEKV
EKTIEDFYAKVDRLNENEEKKRLLRSLERMFVQEAKVHQTLMDVAAPEAKRISAIRNVRN
YTFHFHVDDYLNVIRDAGNPQEVRVVMAEALGWFTNSVQRPHILEEIKKMQQTANLPEDL
KAELEQTIKRLSL