Protein Info for BT1281 in Bacteroides thetaiotaomicron VPI-5482

Annotation: hypothetical protein (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 531 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF12741: SusD-like" amino acids 27 to 526 (500 residues), 599.3 bits, see alignment E=7.3e-184 PF12771: SusD-like_2" amino acids 122 to 488 (367 residues), 250 bits, see alignment E=4.4e-78

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_1281)

Predicted SEED Role

"FIG00937161: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8A893 at UniProt or InterPro

Protein Sequence (531 amino acids)

>BT1281 hypothetical protein (NCBI ptt file) (Bacteroides thetaiotaomicron VPI-5482)
MKNLRYMLIAACSACLLLPLGSCMDTDMNRNKYEVDSEEIGRENYDLGSTIRGLQGLVIP
AQEHLYQFMEAMCGGSYAGYFGETRTGWLEKYSTYNPKTDWLKAPFTDVISETYPKYYAV
LQHEDAPVALALAKLLRVTIMQRVTDIYGPIPYSKVLVSGEGSESDGLNAAYDSQKDVYM
RMFQELEEADQALEDNMTEGNSGFEKLDDVYYGKLQQWRLFLHSLQLRMAMRLCYTDMAA
EAQSIAEKAVTAGVIEKNDDNALFHVAENRSALCFNDWKDYRVGADIICYMNGYADPRRD
KYFTKVKNNDQEGYYGMRIGINSPFSDDDMITSYSNRLMTASDPYVWMTASEVAFLRAEG
ALRKWNMGGEAKDFYETGVKLSFEEHGASGAEDYLNSIASPSGYTDPLGSYSTGSPANIT
VKWNEMGEQAFEENLERIITQKWIALFPNGIESWSEHRRTGYPKLLPVVVNKGRNVSTEA
GMRRLMYPNEEYTQNSFHLNNAINVLIKESSNNQGGDTGGTHVWWDRKANK