Protein Info for BT0921 in Bacteroides thetaiotaomicron VPI-5482

Annotation: conserved hypothetical protein (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1484 PF04357: TamB" amino acids 988 to 1434 (447 residues), 210.1 bits, see alignment E=3.2e-66

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_0921)

Predicted SEED Role

"FIG00937153: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8A996 at UniProt or InterPro

Protein Sequence (1484 amino acids)

>BT0921 conserved hypothetical protein (NCBI ptt file) (Bacteroides thetaiotaomicron VPI-5482)
MSVFIAKELSEVLNTRLTIGKINIGLLNRIIIDDVLLDDQSGKEMLKVTRLSAKFDILPF
FKGKISISSVQLFGFTINLNKETPDSPPNFKFVLDAFASKDTVKKESSLDLRINSVLIRR
GRMAYHVLSEEKTPGKFNAKHVQLQNIIANISLKAMSRDSLNLGIKRLSFDEKASGFSLK
KMSLKLVANDKRTNIENFAIELPETSLKMDTIHLVYDSLKAFDQFSEKVHFSFRTLPSQI
TLKDISPFVPILAHFKEPITLDMQVKGTVDQLTCSHLEITADDRQFRLSGDVSLQELSSP
QDAYVYGKLSELSANNRGVGFLVRNLSSNYNGVPPLLERLGDIDFRGEISGYFTDLVTYG
QLRTGLGNVKTDLKLSSDKAKGLFAYSGAVKTEEFELGKLLNNEKFGEITFNLDVHGRHI
EKQLPAVELKGLIASVEYSRYKYENITLDGEYKQGGFNGKIALDDPNGSIYLNGDVNVTS
KVPTFNFLAVVDKFRPNDLNLTPDYQDAEFSLKVKANFTGGSIDEMIGEINVDSLEFRAP
DKEYFMKNMNVRATRQDNENQLKLTSEFLTANIAGKFQYHTLPASIFNIMRRYVPSLILP
PKKPIETNNNFAFDVHIYNTDILSTIFDVPLTVYTHSTLKGYFNDALQRLRVEGYFPRLQ
YKNNFIESGMILCENPSDHISAKVRLTSLKKNGAVNLSLEAQAKEDKVSTTLNWGNNAIA
TYSGKLAAVAQFLRTAGEKPLLKAMVDVKQTDVILNDTLWQIHPSQVVVDSGKVDVNNFY
FSHHDRYVRINGRLSDNPADTVKVDLKDINMGYVFDIANISDDVNFEGDATGTAYASSVF
KKPVMNTRLFVKNFSLNQGRLGDLNVYGAWDNEKRGIYLDASIQDISPSPSRVIGMIYPL
KPESGLDLNIDAHELNLKFLEFYMKSIAQDIKGRGTGKVHFYGKFKGLNLDGAVMTDASM
KFDILNTHFAVRDTIHLAPTGLKFNNMHIADMEGHSGTLNGYLRFQHFKNINYRFEIQAN
NMLLMNTKESTDMPFFGTVYATGNALLAGNAIQGLDVNLAMTTNRNTVFTYINGNVASAA
STQFIKFVDKTPRRNIQDSIRVNSYFEQMQQKRQADEEEHQTDIRLNILVDATPDATMKI
IMDPIAGDYISAKGTGNIRTEFYNKGDVKMFGNYRISQGIYKFSLQEVIRKDFIIKDGST
ITFNGAPLDANMDIQASYTVNSASLNDLNPDVSSIAQQTNVRVNCIMNLSGILLRPTIKL
GIELPNERDEIQTLVRNYISTEEQMNMQILYLLGIGKFYTEDAARNNQNSNVMSSVLSST
LSGQLNNALSQVFETNNWNIGTNLSTGDKGWTDMEVEGILSGQLLNNRLLVNGNFGYRDN
PMANTNFIGDFEAEWLINRSGDIRLKAYNETNDRYYTKTNLTTQGVGIMYKKDFNKWSDL
FFWNKWKLRSKRKREEAEKVQQQQTDSIADDKAKSELKRKRAQE