Protein Info for BT0709 in Bacteroides thetaiotaomicron VPI-5482

Annotation: hypothetical protein (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 791 transmembrane" amino acids 377 to 394 (18 residues), see Phobius details PF08800: BT4734-like_N" amino acids 58 to 177 (120 residues), 114.6 bits, see alignment E=6.1e-37 PF08708: PriCT_1" amino acids 236 to 299 (64 residues), 63.1 bits, see alignment E=2.3e-21 PF13148: DUF3987" amino acids 372 to 717 (346 residues), 220 bits, see alignment E=8.7e-69

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_0709)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8A9V6 at UniProt or InterPro

Protein Sequence (791 amino acids)

>BT0709 hypothetical protein (NCBI ptt file) (Bacteroides thetaiotaomicron VPI-5482)
MRKHMYQVSLFINTWSKTPTTITFEDFFAMVRNGHWKVPTEGHRSCLAKDRKHDAQTIKD
SMACVIPAGICKNGHAKNNLTSLSLALCIDIDHTDEQTKDIFVRACLLEYVLGAFISISG
RGVKLFIRIDIDGVNDYPAIYEATAKLVSTVLGVENDGKCKDITHPCFGSYDPDAYYNGD
AKAVNDFLPNGALTLRVTYAPVTSAPRTTCTPTSFSNGHPPAMPDNRISAAPFVQSYLTL
YPAATGDRNGTVFRLSCAACKRGIDRNELTTELVRTLEEDNFREPEIARTVKSAYQNVMT
AAETESFENPPSNSSKVQKSVIGFSENENPAEKEDEIIGEELREQTPTFPDEIYDLIPAI
FKECVSIARDERERDGLLLSCITTISSMLPSVSIRYNRRNYQPNIYCIVVASSGANKNLI
GYGIRLHKHYCEYWEKQSLKIEKEYKKALRDYTLSLQAIRKKNTAATNLPDEPEEPKLAF
PLIPADISRAQLITHLINNQSCSSLLTSTEASSVSTARNQDYGHFDDILCKAFEHELISS
SYKINGRHPLKVEYPSLSAFLTGTPSSLILFIPTMETGLYNRFLINTFRLPAAWQDVFAE
EKVRADDLFNELSMRFAQMALFLKDSPTEVKLTDTQKKEFNRVFTQLLKDTDQLGNDDLL
GVVKRYGVITARICCIFSAIDKGTMRMETPEVYCSDAHFKAALAIVLCCFEHSKLVSTSV
KSSAEDTKPLQSPDNLSRLLTKLKKSFSAKEACALGEELNLSRSTVYYLLNKGIKAGRIS
KLGHGSYILKI