Protein Info for DVUA0006 in Desulfovibrio vulgaris Hildenborough JW710

Name: mgtE
Annotation: magnesium transporter MgtE, putative (TIGR)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 331 transmembrane" amino acids 167 to 187 (21 residues), see Phobius details amino acids 195 to 220 (26 residues), see Phobius details amino acids 241 to 262 (22 residues), see Phobius details amino acids 268 to 288 (21 residues), see Phobius details amino acids 308 to 329 (22 residues), see Phobius details PF00571: CBS" amino acids 77 to 124 (48 residues), 33.5 bits, see alignment 4.3e-12 PF01769: MgtE" amino acids 201 to 324 (124 residues), 69.2 bits, see alignment E=4.1e-23

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvu:DVUA0006)

Predicted SEED Role

"Mg/Co/Ni transporter MgtE / CBS domain"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q72WT3 at UniProt or InterPro

Protein Sequence (331 amino acids)

>DVUA0006 magnesium transporter MgtE, putative (TIGR) (Desulfovibrio vulgaris Hildenborough JW710)
MPRKKNRFFKESIMRLARTDVKKFVSGTTIKEALHDIKSSTDDENRIDYFYIVDCDDRLT
GVIPIRRLLTSDDTKTVDDIMITSTIAIPMDCSVLDAHEYFTRHKLLAFPVVDDERRILG
VVDIGMFSKEDIDATDRENMHRAFEIIGLSILQVREASPLRAFRYRFPWLLATIASGTTC
AILAGAYEATLAQSLVLAFFMTLVLGLGESVSIQSMTLAIHTLRSLDPDWKWYVKSFYRE
VGSAVLLGAACWLIVGSIVVLWRDDVAASAVIGSSILLTLCCGVFWGLSIPSLLHKLKLD
MRIASGPLTLALSDISTILIYFGMATFVIGT