Protein Info for DVU0589 in Desulfovibrio vulgaris Hildenborough JW710

Annotation: molybdopterin-guanine dinucleotide biosynthesis protein B, putative (TIGR)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 246 PF03205: MobB" amino acids 13 to 121 (109 residues), 55 bits, see alignment E=8.4e-19 PF04060: FeS" amino acids 163 to 194 (32 residues), 32.6 bits, see alignment 5.4e-12

Best Hits

KEGG orthology group: K03753, molybdopterin-guanine dinucleotide biosynthesis protein B (inferred from 100% identity to dvu:DVU0589)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q72EI9 at UniProt or InterPro

Protein Sequence (246 amino acids)

>DVU0589 molybdopterin-guanine dinucleotide biosynthesis protein B, putative (TIGR) (Desulfovibrio vulgaris Hildenborough JW710)
MSSADKEQSVKAISIIGFKNSGKTTLTARLADAIEARGLTVAIAKHTHHGLDKPDTDTSR
LMKPKRTIIGVGEDECAVFWSTQRHLADLLPLVRADVLLVEGGKSLGWLPRILCLREADE
VKALDRGLALATWGKVGAPPLPHFGADEMDGLASLVLERAFLLPGLDCGACGQEDCAGLG
RMVVAGDATPQDCCSVEGDLAITVNGHAVGLNPFVERIVAGALRGMLAELKGFTPGGDVV
IRMPRG