Protein Info for SO2704 in Shewanella oneidensis MR-1

Annotation: prophage MuSo2, tail fiber protein, putative (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.

Best Hits

KEGG orthology group: None (inferred from 100% identity to son:SO_2704)

Predicted SEED Role

"Prophage long tail fiber protein"

Sequence Analysis Tools

See Q8EDN9 at UniProt or InterPro

Protein Sequence (575 amino acids)

>SO2704 prophage MuSo2, tail fiber protein, putative (NCBI ptt file) (Shewanella oneidensis MR-1)
MHPLRNGSQATARPAIKPLIGTAGWFTESGDNNVPSYPGADWFNHVIAEFQNALAEMGVT
FDPTKDDHLQIIFAYFKDYLEQIGMTVSDNEQVLQTLFSASVVPAKFTAAALSFFNSKKS
TSILGDSITHGAFSGNLFSNGWARLFARALNAEYGSSSYGFTPFLTLGTGPNLSIDVHNV
SISAGWVNFDSNNAESVVTGQFFRSQASGNTISFNLPTFMPRGKLHFVKKPTGGTFDVSI
NGVVTNTVDTNGVLDEFSSVEFALTDNGLGSCTVLITTTSTNDVDFFGISYLSSSLETVC
HNFSISGRRLRYVGDNVLQTVCENSHTLIMALGHNDYGETDLSYQNSVSAKIDFLIEQVN
ANKVLVVVPDFCWSADKNNWMRVLLKKLATQTNGVYVDLPSSLLKNDGSPADSNHLINVL
GMWVDGSHPNERGNAWVFEMIGKAMKLSCTSKVQTLGNHDYRVPLQLSPAVSIKNSLTTT
LSSVVRSGNALLLNFYITKNTVEPIPVGQYVLCSGWPDRFDFSGIQGSVFPVMQIDGSTI
IGGVVVSASGEVVLNITSLSVYNDLYFQVAVARNK