Protein Info for SO1122 in Shewanella oneidensis MR-1

Name: proA
Annotation: gamma-glutamyl phosphate reductase (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

Best Hits

Swiss-Prot: 100% identical to PROA_SHEON: Gamma-glutamyl phosphate reductase (proA) from Shewanella oneidensis (strain MR-1)

KEGG orthology group: K00147, glutamate-5-semialdehyde dehydrogenase [EC: 1.2.1.41] (inferred from 100% identity to son:SO_1122)

Predicted SEED Role

"Gamma-glutamyl phosphate reductase (EC 1.2.1.41)" in subsystem Proline Synthesis (EC 1.2.1.41)

MetaCyc Pathways

L-citrulline biosynthesis (7/8 steps found)
L-proline biosynthesis I (from L-glutamate) (4/4 steps found)
L-ornithine biosynthesis II (3/3 steps found)
superpathway of L-citrulline metabolism (9/12 steps found)
L-N^δ-acetylornithine biosynthesis (5/7 steps found)

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.2.1.41

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8EHU1 at UniProt or InterPro

Protein Sequence (425 amino acids)

>SO1122 gamma-glutamyl phosphate reductase (NCBI ptt file) (Shewanella oneidensis MR-1)
MSQINQAQYLQQLGHNAKQASYALANLTASQKADLLDAIADALTENTLAILAANAKDVAA
AKAEGLNDAMIDRLLLNESRLAGIIGDISDVVRLADPVGEEFGSRVLDNGLRLTRRRVPL
GVIGVIYEARPNVTVDIAVLALKTGNAVILRGGKETLESNKLISEVIRGAIASQGLPVDA
VQLIDSSDRALVTGLLKLDQYVDMIVPRGGQALQRLCAEQATIPVILGGIGICHLYVDKA
ANLERALEVIANAKVQRPTVCNALDTLLVDKTIAANFVPQIVEYLHCLGVRFSVCEQSHA
LLDGLGFDIELATEQSFATEWLSLTLGIKVVSDIDAAIAHIRRHSSGHSEAILTDDIHAA
THFMNEVNSAAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWLAWGD
YTSRA