Protein Info for Rru_A3753 in Rhodospirillum rubrum S1H

Annotation: hypothetical protein (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.

Best Hits

KEGG orthology group: None (inferred from 100% identity to rru:Rru_A3753)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RMU8 at UniProt or InterPro

Protein Sequence (1503 amino acids)

>Rru_A3753 hypothetical protein (NCBI) (Rhodospirillum rubrum S1H)
MPLPDIDFKNIREHGGSRHRAFEELCCQFASLEPRAPEAEHYRKGAGADAGVECFTRFPD
GQETGWQVKYYWDVHNLLRDLDSALNQALTKHPMLTRYVVCIPFDLSDARTGRGKTPLEK
WQAWRDRKIKKATESSRRLTIELWNASTLKERLTREPSQYAGRTFYWFNQQLLTVAWFQQ
KFESAAADLGNRYTADTSVTLPIRRALLGLARDPDLHRQMETWVRDIFRHGRSAVQSATL
LAEVTAPLPADFAQSLLSLEATLPSEPPTASHFYPLKQCRDALNAAARALERTFAWLYNN
ADGVKDAKDRRDRAYRDLRELHNSIHSMSLELEGESWAYVNQSQILVHGGGGVGKSHLLA
DVAAYQIERCRPAVLLLGQNFTEGNPWDQILRELDMPAGTSTQHFLGALDAAAQAAGVRG
LILVDALNERKGTALWPSRLAGFLKQVEAFPHLGVILSCRTTYLAHVIPDSLTEEVLPRL
EHHGFGSKDARAYLKARGFVLPGAPVPAPELNVPLFLKTLCDALERNQQREFPRGMTGVT
AIFSFYRDAVQSFVERRLQLDTRRKIVKRAIEALAEAMAWGVTERLPVEQVQPLFDAILP
SQADRNRDLLTQLESEGMLTVEVDDDGAEVVRFTFQRFSDHVIAARLIDVHIGAASPAAA
FAADAPLLRYVTEPLAWEMAGVVEALAVQLPERFGQELPDLLPAKTSYSVQEAFRESLLW
RAQQNFTQRTLDLVHRILGEKEVLSILLHVATEPDNQFNGLYLHDQLKAWPMPERDAKWS
IPISLIGADEHSPIMTLIEWAWSNGFDVIEDRRAELAGITLSWCLTTSNRTVRDRATKAL
SSLMAKRPNLAANLLARFWEIDDDYLRERLLAAIYGALLQGMMDEGTIGTLALAVYTTLF
DAGAPPLNTLIRDHGRGIVEYALWRQCLPPEVDLTKARPPYRSPWPLEHIPNEIIENYTD
TYGSGARYSDQIVSSAVQDGDFARYVIDSHVRNWSPAPLGVTRLPSDPEVGLSWLADFSA
TASPEAVTAFMEMAEKAKLLNGRGRWEQTPEREAFEESERAFRSTITSDAWEDYRVSIQP
WIANGMGSWAGRSTALFNQRWARRWVCMRAHDLGWSEQLHGAFDRGRQISHGRMSHSVER
IGKKYQWLSLYELGGRLADNCAFIGGRNAGEAPGSYPGETCGSLRDIDPSLLAESAQDDG
GTRFDEPVWWSPIHPVLKASTPTERLQWLHSQDGMINDVRCIDVAGRDSGRWLVLHSFTS
VGERPWGDDERGMDSWARINCVVVKRRDLSRLLRGLQTKRLSDPHALPFIEIYGHEHYIG
EYPWHTSFSDFSDWEEPGDGLGSLPTAARPTVTEYTCERGGYDGSIDDAIRVEMPAPWLI
RDMELHMSDGRRPTFLDRAGSIRFFDPALTEQGPHAALVDREAFLRTLDKAGLAPVWVIA
GEKNVYGGDGKGFGGRLNFTSLYWQQDGDWEIKHYTYFEPPAKKQVETLFGGPVPSWVPV
CED