Protein Info for Rru_A3267 in Rhodospirillum rubrum S1H

Annotation: Methionine biosynthesis MetW (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 211 PF07021: MetW" amino acids 11 to 205 (195 residues), 265.8 bits, see alignment E=5.1e-83 TIGR02081: methionine biosynthesis protein MetW" amino acids 11 to 205 (195 residues), 251.6 bits, see alignment E=2.2e-79 PF13847: Methyltransf_31" amino acids 23 to 111 (89 residues), 31.4 bits, see alignment E=3.8e-11 PF13489: Methyltransf_23" amino acids 23 to 173 (151 residues), 37.9 bits, see alignment E=3.7e-13 PF13649: Methyltransf_25" amino acids 27 to 110 (84 residues), 32.5 bits, see alignment E=2.8e-11 PF08241: Methyltransf_11" amino acids 28 to 111 (84 residues), 36.1 bits, see alignment E=2.2e-12

Best Hits

KEGG orthology group: None (inferred from 100% identity to rru:Rru_A3267)

Predicted SEED Role

"Homoserine O-acetyltransferase (EC 2.3.1.31)" in subsystem Methionine Biosynthesis (EC 2.3.1.31)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.3.1.31

Use Curated BLAST to search for 2.3.1.31

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RP83 at UniProt or InterPro

Protein Sequence (211 amino acids)

>Rru_A3267 Methionine biosynthesis MetW (NCBI) (Rhodospirillum rubrum S1H)
MTPTGPTGAIRYDLQLIADMVTPGARVLDVGCGEGDLLSYLRTFKQVDGRGIELSMAGVR
AAVSQGVPVIQGDADTDLSDYPDGAFDYAILSQTLQATERPRDVLINMLRIADRAIVSFP
NFAHWRGRLHLLVRGRMPVSEYLPYEWWETPNIHFCTIRDFLKLCRELDLTVERALALDE
RGRPERFPANCPIANFMSAQAVFLLARGSRR