Protein Info for Rru_A2997 in Rhodospirillum rubrum S1H

Annotation: Phosphate acetyltransferase (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 703 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details PF13500: AAA_26" amino acids 5 to 210 (206 residues), 70.9 bits, see alignment E=2.1e-23 PF07085: DRTGG" amino acids 214 to 325 (112 residues), 79.7 bits, see alignment E=2e-26 PF01515: PTA_PTB" amino acids 371 to 686 (316 residues), 411.5 bits, see alignment E=4.3e-127 TIGR00651: phosphate acetyltransferase" amino acids 386 to 686 (301 residues), 419.1 bits, see alignment E=6.2e-130

Best Hits

KEGG orthology group: K13788, phosphate acetyltransferase [EC: 2.3.1.8] (inferred from 100% identity to rru:Rru_A2997)

Predicted SEED Role

"Phosphate acetyltransferase (EC 2.3.1.8)" in subsystem Ethanolamine utilization or Fermentations: Lactate or Fermentations: Mixed acid or MLST or Propanediol utilization or Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate or Threonine anaerobic catabolism gene cluster (EC 2.3.1.8)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.3.1.8

Use Curated BLAST to search for 2.3.1.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RQ03 at UniProt or InterPro

Protein Sequence (703 amino acids)

>Rru_A2997 Phosphate acetyltransferase (NCBI) (Rhodospirillum rubrum S1H)
MPARMFFLAPMAQDVGLTSVALGLARALQRDGIKVGFAKPIGHAEADGEPGDPSSHFARS
LCLLEAPESIAFARAEDQVRRGDLAALMEEVVTLVDGLRASHDAVIIEGLIPGADTQVAG
RLNAEMARALGADLIPVLSGAGRDGADLAEAIALARRQYDGAQNAAFAGVLINKVSPSHG
AELRGDLERAVGERLPILATIPFETRLQSPRLADVVRGLGLTVEHEGALAQTRVREIVIA
ARSVENIIERLRPGALVVTPVDRIDIVLAATLASLRGVPLAGVLLTCGGSLPDTVASLVL
SARPEGLPILSTPADTYATASRLSRLSGHVGADDHAQMEEVIDFIAEQIATAPLRRRIGE
PGEVRMSPPAFRNRLIQSARRAAKRIVLPEGDEPRTLQAAIACHAKGIARCVLLGHPAQV
RQVASAQGLEIPADLEILDPELVRGRYVEALVEMRRAKGLTALQAAAQLEDTVVLGTVML
ALGEVDGLVSGAVHTTASTVRPALQLIKTAPGASIVSSVFFMLMPDQVLVYGDCAINPNP
TAEQLADIAIQSADSALAFGIEPRVAMISYSTGSSGVGDDVEKVRAATALAKLKRPDLMI
DGPMQYDAASVESVGRQKAPDSPVAGRANVFVFPDLNTGNTTYKAVQRSANVVSVGPMLQ
GLRKPVNDLSRGALVDDIVYTIALTAIQADQGADPMAEKVAAE