Protein Info for Rru_A2880 in Rhodospirillum rubrum S1H

Annotation: hypothetical protein (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 875 transmembrane" amino acids 35 to 55 (21 residues), see Phobius details amino acids 74 to 93 (20 residues), see Phobius details amino acids 105 to 129 (25 residues), see Phobius details amino acids 152 to 176 (25 residues), see Phobius details amino acids 188 to 208 (21 residues), see Phobius details amino acids 229 to 251 (23 residues), see Phobius details amino acids 257 to 275 (19 residues), see Phobius details amino acids 281 to 299 (19 residues), see Phobius details amino acids 309 to 328 (20 residues), see Phobius details amino acids 349 to 371 (23 residues), see Phobius details amino acids 384 to 407 (24 residues), see Phobius details amino acids 417 to 438 (22 residues), see Phobius details amino acids 440 to 460 (21 residues), see Phobius details amino acids 475 to 497 (23 residues), see Phobius details amino acids 517 to 536 (20 residues), see Phobius details amino acids 851 to 865 (15 residues), see Phobius details PF03706: LPG_synthase_TM" amino acids 43 to 320 (278 residues), 45.2 bits, see alignment E=9.4e-16 PF09924: LPG_synthase_C" amino acids 557 to 847 (291 residues), 328.1 bits, see alignment E=4.6e-102

Best Hits

KEGG orthology group: K14205, phosphatidylglycerol lysyltransferase [EC: 2.3.2.3] (inferred from 100% identity to rru:Rru_A2880)

Predicted SEED Role

No annotation

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.3.2.3

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RQB8 at UniProt or InterPro

Protein Sequence (875 amino acids)

>Rru_A2880 hypothetical protein (NCBI) (Rhodospirillum rubrum S1H)
MDGVNLPAQPAEGKAETPPHWTSGIVAVLAARRHALASAAGVVVLAVLSFAIYHMAREVD
FQDVLAALRGTPWHAVGWAVLLTAVSFLSLSVYDVEALAHIGHKVPYPVVALTSFCSYAV
GNTAGFGPLTGGAIRFRFYAPMGLEPECVGKVVVFVTAAFGLGLTAVTALSLLVAADDVA
GVLSLPPLALQGGAVLAIGGLLALVVRASRPESKVALGRVALRLPRPRIMLGQFAATAVD
IVACAGILWVLLPEIGLGFPAFVTLYAVAIGLGVLSHVPAGLGVFETIMIATLGRLAPMD
QILGALVLYRVIYHILPLLLATVLVSIVETRRAMAGPAASKVVRSASQMAPPVISAMTLV
LGAMLIFSGVTPALPGDLDILDAWIALPIVESAHFLASVLGLALVIVARGLAFRLDGAWW
AAIAAAALAVVLSVLKAVALGEAIVLSVLVLALLATRAEFSRPASLLHQTLTPPWLAAIA
TIVISAFVLLFLTYQGVDYTDDLWWQFEISNEAPRSLRALLAVSLGAGSFAIWNLLRPAP
GRTHLPSPQEIDRALAILETQPMAAANLLRMGDKSLMFSEDGKAFIMYGRQGRSWVALFD
PVGARDSWPELVWRFVETARASGGRAAFYQVVPENLALYADAGLSAFKLGEEARIPLADF
SLSGSKRYGLRQTVSRCSRDGLVFSLLSPDEIAAEMDRLEEISDAWLASHRAREKRFSLG
AFDRSYVQSQTVAVLRRADQIVAFATVMTTALTEEATIDLMRFDDEAPRSAMEFLFIRLM
EHFKAAGYDRLHLGMAPLSGLSSSPAAPFWHRVGRAVFEHGERFYNFQGLRAFKAKFQPE
WQPRYLAVAGGLNPALALADIATLIGGGLKGVVGK