Protein Info for Rru_A2865 in Rhodospirillum rubrum S1H

Annotation: Peptidase M24 (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 677 PF01321: Creatinase_N" amino acids 84 to 214 (131 residues), 53.4 bits, see alignment E=8.1e-18 PF16189: Creatinase_N_2" amino acids 225 to 385 (161 residues), 138.7 bits, see alignment E=3.7e-44 PF00557: Peptidase_M24" amino acids 389 to 601 (213 residues), 175.2 bits, see alignment E=3.1e-55 PF16188: Peptidase_M24_C" amino acids 614 to 677 (64 residues), 70.3 bits, see alignment E=2.1e-23

Best Hits

KEGG orthology group: K01262, Xaa-Pro aminopeptidase [EC: 3.4.11.9] (inferred from 100% identity to rru:Rru_A2865)

Predicted SEED Role

"Xaa-Pro aminopeptidase (EC 3.4.11.9)" (EC 3.4.11.9)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.11.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RQD3 at UniProt or InterPro

Protein Sequence (677 amino acids)

>Rru_A2865 Peptidase M24 (NCBI) (Rhodospirillum rubrum S1H)
MNDSFDGLDIDSITRDLEGIGGALSPGDLATLVAGAAAAPAAGGEGWLDLIGAPVNAPLR
GALVDLRARAAKAFAHSRVPLPERLVAVRRRMAEENLDGLIVPHADEYQNEFIPLRAERL
AWLTGFSGSAGTAVVLAERAAIFVDGRYTLQVRGEVDAGAFSFHHLIDEPPARWLETALP
TGARLGYDPWLHSPAERDRLREACKRAGAHLVALETNLLDAAWSDQPPTPLSPVVPHPEG
YSGRGGAEKREDIAEALTKDGQDAVVLSAPDSIAWLFNIRGGDVAFTPLPLSYALLHGDG
SAEIFVDPLKVSAGLAAHLGNRVRLSPPSALAPALSALGRRHAKVRVDWTATPSWIVDRL
EEAGAAIVRAADPCVLPKAIKNAVELEGSRAAHRRDGLAMVRFLHWLSQEAPKGTLSELA
VAEKLGRLRAVDPLLRGLSFGTISAAGPNAAFCHYHASPESDRRLVPGSLYLVDSGGQYL
DGTTDITRTVAIGTPTPAMRRCFTLVLKGHLALGRARFPQGTTGHQLDALARQPLWAEGM
DYDHGTGHGVGSFLGVHEGPARISKAANAVPLVPGMILSNEPGYYREGEFGIRIETLVAV
RPVDPAPEAADRVFLEFETLTVVPLDRTLIDAALLDIYERAWVDAYHARVRETHAPLLDT
PDDRPVLDWLIAATAPL