Protein Info for Rru_A2772 in Rhodospirillum rubrum S1H

Annotation: ATP phosphoribosyltransferase (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 227 TIGR00070: ATP phosphoribosyltransferase" amino acids 12 to 199 (188 residues), 180 bits, see alignment E=2.1e-57 PF01634: HisG" amino acids 63 to 219 (157 residues), 163.1 bits, see alignment E=2.6e-52

Best Hits

Swiss-Prot: 100% identical to HIS1_RHORT: ATP phosphoribosyltransferase (hisG) from Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1)

KEGG orthology group: K00765, ATP phosphoribosyltransferase [EC: 2.4.2.17] (inferred from 100% identity to rru:Rru_A2772)

Predicted SEED Role

"ATP phosphoribosyltransferase (EC 2.4.2.17)" in subsystem Histidine Biosynthesis (EC 2.4.2.17)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.4.2.17

Use Curated BLAST to search for 2.4.2.17

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RQM6 at UniProt or InterPro

Protein Sequence (227 amino acids)

>Rru_A2772 ATP phosphoribosyltransferase (NCBI) (Rhodospirillum rubrum S1H)
MVFDARDGADKLVIALPKGRILKEAMPLIEAAGLSPEPSFDDPDSRQLRFSTSDPRVDII
RVRSFDVATFVAFGAAHIGVAGNDVILEFNYPELYAPLDLGIGACRLSVAEAERFSAEDD
PGRWSHIRVATKYPEITRRHFAARGVQAECIKLNGAMELAPALGLCRRIVDLVSSGATLK
ANGLVEVERILDVTSRLVVNRTAMKVRSREMTAWIERFREACDAVAA