Protein Info for Rru_A2213 in Rhodospirillum rubrum S1H

Annotation: sulfotransferase (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 656 PF13432: TPR_16" amino acids 38 to 96 (59 residues), 23.5 bits, see alignment 4e-08 amino acids 78 to 113 (36 residues), 17.7 bits, see alignment 2.6e-06 amino acids 110 to 167 (58 residues), 34.6 bits, see alignment 1.4e-11 amino acids 172 to 235 (64 residues), 23.1 bits, see alignment E=5.5e-08 amino acids 243 to 302 (60 residues), 18.6 bits, see alignment 1.4e-06 PF14559: TPR_19" amino acids 79 to 121 (43 residues), 25.7 bits, see alignment 7.6e-09 amino acids 113 to 169 (57 residues), 32.2 bits, see alignment 7.3e-11 amino acids 212 to 277 (66 residues), 34.2 bits, see alignment E=1.8e-11 PF13181: TPR_8" amino acids 100 to 131 (32 residues), 15.1 bits, see alignment (E = 1.4e-05) PF07719: TPR_2" amino acids 100 to 132 (33 residues), 23.5 bits, see alignment (E = 2.7e-08) PF00685: Sulfotransfer_1" amino acids 410 to 602 (193 residues), 40.4 bits, see alignment E=1.5e-13 PF13469: Sulfotransfer_3" amino acids 411 to 602 (192 residues), 143.5 bits, see alignment E=8e-45

Best Hits

KEGG orthology group: None (inferred from 100% identity to rru:Rru_A2213)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RS82 at UniProt or InterPro

Protein Sequence (656 amino acids)

>Rru_A2213 sulfotransferase (NCBI) (Rhodospirillum rubrum S1H)
MPRLPRPPGSSTLRPGAVALGRPDPGPDLNSPEGLIRAARDWLGAGDDQRARLALDRALA
LRPRAAEALLLRGLVDQRRGDLAAAAEWFRRAIRARKDFADAHLNLGSCLIGLGQTEEAL
RQFGRAVALAPGMALAHLNLAQALLDQGDLGRARSAIDRARALAPDALPILLARARILAA
QEDYEAAGAAWEDCVARAPGDVLVLNDAANFLLEDNRVEDSLALYRRAVALAPTSQEVRK
NLIRALMTTGALDEAEAEAVGWLGTQGEDPRFRRLLGDVLVRAGRFPEARSAYVAAWDAL
PEDDNIPLGLTATGKMKSGEALGDRILERWTAQGAAGVVSADIAYAAGKVLDDRQDYDGA
FAAFAQANRLKAADHPFDADAHDRFVEAVSTVFTPALFERFAGLGSPSETPVLVVGLPRS
GTTLVEQIIASHPQAAGAGELTHVSRFEHSLPWRVGEAGRRGYPACVAGLDGAILDRFTA
HYLHELTRIGPKARRVVDKLPNNFLRLGLFALAFPKARIIHCRRDLVDTCLSLYFQSFAG
GHEYRHDLVSLGRYARAYLAMMAHWRRVLPLPMLEVDYADVVADQEKASRTMLEFLGLAW
DEVVLRFHKREATVATASRWQVRQPIYATSVARWRRYEQHLSPLLLSLEGKKPSKG