Protein Info for Rru_A1495 in Rhodospirillum rubrum S1H

Annotation: hypothetical protein (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 441 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details transmembrane" amino acids 30 to 51 (22 residues), see Phobius details amino acids 61 to 80 (20 residues), see Phobius details amino acids 84 to 84 (1 residues), see Phobius details amino acids 86 to 88 (3 residues), see Phobius details amino acids 90 to 108 (19 residues), see Phobius details amino acids 117 to 134 (18 residues), see Phobius details amino acids 188 to 210 (23 residues), see Phobius details amino acids 217 to 233 (17 residues), see Phobius details amino acids 239 to 258 (20 residues), see Phobius details amino acids 265 to 285 (21 residues), see Phobius details amino acids 344 to 367 (24 residues), see Phobius details amino acids 378 to 396 (19 residues), see Phobius details amino acids 402 to 420 (19 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to rru:Rru_A1495)

Predicted SEED Role

"hypothetical protein Rrub02001449"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RU99 at UniProt or InterPro

Protein Sequence (441 amino acids)

>Rru_A1495 hypothetical protein (NCBI) (Rhodospirillum rubrum S1H)
MSVLAVIYLLMAELSDLVAAIVLATTEWEGIGALLTSRHLLVFALFAVGFLRPDLPPMLR
WSCGVYLGVIGLYVLASLGGEAGIGLVVRSAAKLALPAVLVVAGFAALRTARALRRYMVV
LVCFGLASMVFGLWERQHTGFWTDFVEYGEYLSTTKDVLSGFRPDVFLPFNFYGYDQSEG
LGLARRAAGLVASPLAQGTLLAFCALIGFAGLRTRSPWIGGLVLCLLGYGVYASGTRGAL
LMLVIALPLFIVLTQANLGRLGRDGVLLALGFAASFQALAAIYGYTVEMEDGSTIGHLWA
LQDNFLNAGSVLVIGDGLGAAGTLAASANLEITGGLEGAVFSALYQIGGPGALAFLWVYG
AVIVLLFRRRQPGPPGEVAAAMVAFAVGASTSLVISDSLMSLSGMAPFWLAAGGVIASVA
EPVRRRPDPVEAQGEVGERVA