Protein Info for Rru_A0951 in Rhodospirillum rubrum S1H

Annotation: Cell cycle protein (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 392 transmembrane" amino acids 42 to 60 (19 residues), see Phobius details amino acids 80 to 99 (20 residues), see Phobius details amino acids 105 to 124 (20 residues), see Phobius details amino acids 145 to 161 (17 residues), see Phobius details amino acids 167 to 188 (22 residues), see Phobius details amino acids 190 to 192 (3 residues), see Phobius details amino acids 204 to 232 (29 residues), see Phobius details amino acids 290 to 312 (23 residues), see Phobius details amino acids 324 to 345 (22 residues), see Phobius details amino acids 361 to 382 (22 residues), see Phobius details PF01098: FTSW_RODA_SPOVE" amino acids 45 to 386 (342 residues), 255.9 bits, see alignment E=2.9e-80

Best Hits

Swiss-Prot: 44% identical to FTSW_CAUVN: Probable peptidoglycan glycosyltransferase FtsW (ftsW) from Caulobacter vibrioides (strain NA1000 / CB15N)

KEGG orthology group: K03588, cell division protein FtsW (inferred from 100% identity to rru:Rru_A0951)

Predicted SEED Role

"Cell division protein FtsW" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RVU3 at UniProt or InterPro

Protein Sequence (392 amino acids)

>Rru_A0951 Cell cycle protein (NCBI) (Rhodospirillum rubrum S1H)
MTMRVVTAPAEPPQGASHVAPSFTRMDTSVLGRWWWTVDRPMLGAVALLIAAGVFLILAA
GPPAAGRIGAQTYHFVQRQFLFVPVAGVLVIAVSLLPVLWVRRIAVLLFALFMVLLLGTL
FVSSDIKGASRWIAIGPFALQPSEFVKPTFAVVTAWMFASARTQDRFPGNLIAMLLMAVV
GALLVAQPDFGMTMVVACVWGTQFFLAGLSLVWVVLLAAVGMIGAVIAYFALPHVQSRVD
RFLDPASGDQYQIRQSMKAFMEGGLFGRGPGEGRVKEFLPDAHTDFIFAVAGEEFGLFLC
LTIVALFAFLIIRSAIRLRREQNLFVLIAAGGLLTQLGLQALINMASSLSLIPTKGMTLP
FISYGGSSLLSTAVAMGMVLALTRRRAHGERT