Protein Info for Rru_A0771 in Rhodospirillum rubrum S1H

Annotation: hypothetical protein (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1495 transmembrane" amino acids 762 to 783 (22 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to rru:Rru_A0771)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RWC0 at UniProt or InterPro

Protein Sequence (1495 amino acids)

>Rru_A0771 hypothetical protein (NCBI) (Rhodospirillum rubrum S1H)
MPRRTDPLSHLRDCLSKLPAAGENGFEGLLRDSVAKLIGRRLSLAKGGGAQGGSDMASAP
YDDGPTIAIEAKRYGPTRIRLDELKYKIGEAVERRPDLDIMVFGATREINANDRDALIAF
GSTKGIGVATIDWPDSATIAPQLAVLCALVPEALLDLIEPAQREAINSCLDQMQSHPQFE
CAKERLIQELIRPDMGWSSARFAMADWLRRTFSNRNLALADLKGWANLLDSEVRLVPRPW
LVGALDEWWADPGKAPFAMVGEEGVGKSWAPFAWWHERAGSDGSGLPLPLVVPATEIGEA
DIEGLVASLLARRTGLRDDVFWKRRVGLWLKAHTTTPRFLLVIDGLNEHWSFTKWDEILA
RFAAEPWRGKAAIIITDRPDHWEQVKHSVGRVQPPPQKCDVVGFSDEELNNLLELHGMTR
DMFAPELIPLMKIPRLSTLAIRHHVAMADSGDITRERLIYLDWSDRMDRKGMKLVDDIAF
REYIAGVGRQLHARLLSGADLDLSITRRNITDTLSADSDRPRDVLDATVSEIVAGLWMSP
IHGKANRFRLNKDLVPFALALGLVDHLRDVPPAGLNDQIAQFFEPLKGQDLAVDFLRAAV
TIALHDSACSTSLRRILLEAWCRRQNFRQVDFAAFYRLLTQDISVFFALAEDEWLHRHSG
FHLDEILIKGFASAAERWPRVHERILVWCSTWLGTHWGDPIEKMVIGYDPAADGVAERCA
RTRDRRISWDAAMRGATLGSFGSSIPIRSGIDGDVSWLACRVIGILSYLPCALIVPALTP
WAVSRSIMNGRPQAEQVEWVLRLAGRDGDAAVNAAVQREADQLLAFNNHVAKDAAWRLLA
AFATPHAASRAKALTREVSKRRERSSTVTVDDGGFLRWNQERCRSRETTLWAAGDLSPHA
TNPECELSDQDAAALAALVDATDASQLWAIFGQTDQDIALEQAEAALARWAPEALGALVR
RTFECVGGRDQEGLKKLADKTSANLFLLDTSACAQVSEVVRSSLANDEDGEGVGSELQLA
ALAGKTAQQQIAFFCECSYGSNFDRKHAVVLNQPTEADFDRVAEYLFPDAPVRQLRGWLW
YLSHVSLDALPRGYPTLAPLFRHKDDKVRQLALEVAANSNQPELAVAVADSGWLHTEGMN
REEAIDGSLALIKAASHLPADVLRSRIDPQAWGYLAIRDGATEDDLDAFAEVVKRMIHDD
LFGQSPSKVYPQRHFILREPIDRLVERQGEKVINWLRPIIHGTSRVRFRLLCGDFLYIDL
CRALFRYRPDDGAALWQSMRKENESGIFKSSAYKFLPFEAPDSELVSELRHHVCDAAKTD
EDFGQIAAVVIKSDREIWLIERIQRELAGPSAGSIARGLWLAGLLNATPGAENLWATTLA
VPPGPGWLADVYDEAQRLYCQNGWAQHWLEAFLTERDRDRAFGYYRLFLRCADRRALVWA
SRRVDKVWGDLPELWRVHWMLSWEELCAATDERAKASKEYFCGTKITTHIQWPWR