Protein Info for Rru_A0702 in Rhodospirillum rubrum S1H

Annotation: Molybdate ABC transporter, ATP-binding protein (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 370 TIGR02142: molybdate ABC transporter, ATP-binding protein" amino acids 4 to 359 (356 residues), 422.4 bits, see alignment E=7.8e-131 PF00005: ABC_tran" amino acids 16 to 160 (145 residues), 101.3 bits, see alignment E=7.5e-33 PF03459: TOBE" amino acids 294 to 359 (66 residues), 29.3 bits, see alignment E=8.1e-11

Best Hits

Swiss-Prot: 100% identical to MODC_RHORT: Molybdenum import ATP-binding protein ModC (modC) from Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1)

KEGG orthology group: K02017, molybdate transport system ATP-binding protein [EC: 3.6.3.29] (inferred from 100% identity to rru:Rru_A0702)

Predicted SEED Role

"Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)" in subsystem Molybdenum cofactor biosynthesis or Transport of Molybdenum (TC 3.A.1.8.1)

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.29

Use Curated BLAST to search for 3.6.3.29

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RWI9 at UniProt or InterPro

Protein Sequence (370 amino acids)

>Rru_A0702 Molybdate ABC transporter, ATP-binding protein (NCBI) (Rhodospirillum rubrum S1H)
MLDIDVLRQQGALRLSIAFRAGKGVTALFGRSGAGKTSVISMVAGLSRPDGGRIVVDDRV
LFDGAKGIDLAPEKRRVGYVFQEGRLFPHLTVRQNLAFGMNRVPAAERYVGEDDVVDLLG
ISALLDRRPAKLSGGEKQRVAIGRALLASPRILLMDEPLASLDAQRKDEVLPFIARLPRR
FSIPILYVSHAMDEVLRLADTLVLIAEGQVAASGPLEEVLARPDIPDFAAQRDAGAVVAA
KVAGRDIPFGATLLDTPAGLLRTRPIDLPLGTKVRVRIAAADISLALERPRMVSVQNILA
ATILAIGEPEDGRLSVDLDAGPPGGPPCRLWASITARARHDLGLVPGLRVHALIKAMSLL
RDELVEHSPH