Protein Info for Rru_A0232 in Rhodospirillum rubrum S1H

Annotation: hypothetical protein (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 904 transmembrane" amino acids 24 to 43 (20 residues), see Phobius details amino acids 49 to 70 (22 residues), see Phobius details amino acids 74 to 98 (25 residues), see Phobius details amino acids 170 to 188 (19 residues), see Phobius details PF13779: DUF4175" amino acids 28 to 904 (877 residues), 787.1 bits, see alignment E=9.4e-241

Best Hits

KEGG orthology group: None (inferred from 100% identity to rru:Rru_A0232)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RXV8 at UniProt or InterPro

Protein Sequence (904 amino acids)

>Rru_A0232 hypothetical protein (NCBI) (Rhodospirillum rubrum S1H)
MAPKSAKTAPRRPLPPLRRPARAMRGPWLRVSLGLAWLVLVWERLLRGFWPALAGTGIGL
ALALSGVTSLLPGWLHLALLIALILALGVAFGLGAWRFSWPTRGQAWRALEKNARQGHRP
LTASADVLALGGEDPLSRALWRRHRNRMAAEARALRPSAPTPIMAGLDPHGLRVVPILLL
AVALVAGHRDPGARLLAFLSPSVLPAHAPPTATVWLTPPDYTGQPPLRLDTAIEGAATSG
QAAEDGAASPLSLPAGTALLALVHGRAEAGLVIAGERQTALTRLDDQTLRAETTVDSQGR
LVVRAEGRILVDRPLAVIADAAPVIAFTQPPDTGPRWRLRTRLAASDDYALTAAGLTLRP
IRQQPGDPEATMDLALPLAGSDRRSAEIVAFHDLTAHRWAGRAVEITPWATDGAGQRGEG
PALRVVLPRRVFSHAVAQAIIAERDRVSDSLATYGEAVTGLDGIARHPDAFGGDPAVFLA
LRAARAHLAGRGEASDIDRVRALLWAAALRVEEGDASRANARLDALRERIDQALSGPIDQ
REMDQLLRETRAALQDLMRALAQTMPSAATLPPDMMAEMESTDLDDLLARMQEMNRLGAQ
DALRDMLANLDQMLQSLQAGAPSAEDMAAMERMGKAADALGRMRRDQNSLLDETFRENQT
RSADLAPPPRPGDQGNGLVPPFDGPTIEGGLLSLPWLRQPSIQAPSDPSLPHQIPPSEPG
GPGPKVGTRGGGAASPAPPPPQAGEAVADDLARRQKALTGRMEELLAEIAEMTGTLPADL
GEAALTMDDAAAALDKGALQDAMTSQRRALELLSSGRQQAMAQMRQAIGSGMPMMMPMPG
GGPGRMGADPLGRGGSGSPERVGLPSRPDAQRARDILDELRRRANDPERSRPEKDYLERL
IPEY