Protein Info for Xcc-8004.870.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: MoxJ protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 584 transmembrane" amino acids 21 to 39 (19 residues), see Phobius details PF00497: SBP_bac_3" amino acids 81 to 304 (224 residues), 43.2 bits, see alignment E=1.1e-14 TIGR03871: quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein" amino acids 81 to 309 (229 residues), 263.2 bits, see alignment E=1.1e-82 PF12796: Ank_2" amino acids 369 to 446 (78 residues), 43.2 bits, see alignment E=1.5e-14 amino acids 420 to 482 (63 residues), 33.3 bits, see alignment E=1.8e-11 amino acids 435 to 516 (82 residues), 35.2 bits, see alignment E=4.5e-12 amino acids 462 to 552 (91 residues), 46.6 bits, see alignment E=1.3e-15 amino acids 495 to 578 (84 residues), 37.1 bits, see alignment E=1.1e-12 PF00023: Ank" amino acids 391 to 421 (31 residues), 16.6 bits, see alignment (E = 2.4e-06) amino acids 423 to 451 (29 residues), 16.2 bits, see alignment (E = 3.3e-06) amino acids 523 to 554 (32 residues), 22.4 bits, see alignment (E = 3.5e-08) PF13637: Ank_4" amino acids 405 to 444 (40 residues), 27.7 bits, see alignment 8.3e-10 amino acids 524 to 572 (49 residues), 25.7 bits, see alignment 3.6e-09 PF13857: Ank_5" amino acids 410 to 464 (55 residues), 38.5 bits, see alignment 3.4e-13

Best Hits

KEGG orthology group: None (inferred from 100% identity to xca:xccb100_0717)

Predicted SEED Role

"MoxJ protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H2X3M9 at UniProt or InterPro

Protein Sequence (584 amino acids)

>Xcc-8004.870.1 MoxJ protein (Xanthomonas campestris pv. campestris strain 8004)
MTHLQGVRHAHRQVTAGVRGLTRHLCMVLVGCSLGLVAAGCTREPSSPTARASHSDAAPA
TPTASPAPASTPPPAADPSVLRVCADPGNMPLSNKAGEGFQNKIAQVVAEAMGRRLEYEW
RTYYQRGLARSTINAGRCDVLMDLNSDFEMGLTTRPLYRSPYVLVTRKGLDLVPTSLDDP
ALKKLRLGVFQSSPARQALYEHGVSGEVKYLFYDSATAPEEHPGKLVERVAAGELDAAES
WGPVAGYYAARNNLGVVPLNTIDDAVLEYSMAWAVARKNAALRDALNTALQQSAAKIDEI
LRSYHVPLVRCADCIVAGDLASHGPYVTPASAPKSTNAATSSQELAQLQLRIADGADPNQ
ELAHALDAGDALRAAWLLRHGADANQPNLLGEPPLHQAIRNQEPDLVGLLIDAGARLDAR
DGNGWTALMKAAWGNDADSVQRLLARRAPLDTVSSDGWNALELAVSYADVGVVEALLKAG
AKARGANRTGFTPVMFAVPREDPAILDALLKHGADVRGANQAGVTALMLAAASGREATAK
RLLAAGADPAARNRDGKTAATLAQERGDAALAALLAPGKRSTTQ