Protein Info for Xcc-8004.706.1 in Xanthomonas campestris pv. campestris strain 8004
Annotation: Propionyl-CoA:succinyl-CoA transferase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 58% identical to SCACT_ACEAC: Succinyl-CoA:acetate CoA-transferase from Acetobacter aceti
KEGG orthology group: None (inferred from 100% identity to xcc:XCC3588)MetaCyc: 58% identical to succinyl-CoA:acetate CoA-transferase monomer (Acetobacter aceti)
RXN-8807 [EC: 2.8.3.18]
Predicted SEED Role
"Propionyl-CoA:succinyl-CoA transferase"
MetaCyc Pathways
- pyruvate fermentation to acetate V (3/3 steps found)
- TCA cycle VII (acetate-producers) (7/9 steps found)
- acetate formation from acetyl-CoA (succinate) (1/1 steps found)
- pyruvate fermentation to acetate VI (2/3 steps found)
- anaerobic energy metabolism (invertebrates, mitochondrial) (5/10 steps found)
- superpathway of anaerobic energy metabolism (invertebrates) (10/17 steps found)
- succinate fermentation to butanoate (1/7 steps found)
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.8.3.18
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A0H2X3B0 at UniProt or InterPro
Protein Sequence (559 amino acids)
>Xcc-8004.706.1 Propionyl-CoA:succinyl-CoA transferase (Xanthomonas campestris pv. campestris strain 8004) MRSVMSLPPLSRLGRRQGVNAFPPPDRIHHCTIVEAPPRQRSGDNLASPVTRYAPMSDER ILNAPLRDHLVSAEAAAALIQPGETVAMSGFTGSGYPKAVPMALAQRIEAAHLQGEAFQI KLMTGASTAPELDGALAKADGIAMRMPFQSDPDARQRINAGTLDYIDIHLSHVAQHVWFG FYGQIDTAVVEVSAIRADGSLVPSTSIGNNKTWLDLARKVIIEVNDWQPAGLDGMHDVYY GTALPPHRKPIPLLHGDDRIGEPSLRCDPDKIVAVVRTHGPDRNSPFAAADDSSERIAEH LIAFLRHEVSKGRLPANLLPLQSGVGNIPNAVLAGLARSGFRDLEAFTEVIQDGMLALLR DGVLRYASCTGFALSPEGNEEFKRNIDFYRQRIVMRTQEISNHPELVRRLGCIGMNGMIE ADLYGNVNSTHVMGSRIMNGIGGSGDFARNGFLSIFLSPSIAKAGSISSIVPMVSHVDHT EHDVSVIVTEQGLADLRGLTPKQRARQLLEHCVHPRYRDALEDYVARANRDSYGKHTPHL LTEALAWHQRWLETGDMLG