Protein Info for Xcc-8004.706.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: Propionyl-CoA:succinyl-CoA transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 559 PF02550: AcetylCoA_hydro" amino acids 67 to 276 (210 residues), 105.3 bits, see alignment E=4.5e-34 TIGR03458: succinate CoA transferase" amino acids 67 to 557 (491 residues), 778.4 bits, see alignment E=1.3e-238 PF13336: AcetylCoA_hyd_C" amino acids 378 to 524 (147 residues), 139.3 bits, see alignment E=1e-44

Best Hits

Swiss-Prot: 58% identical to SCACT_ACEAC: Succinyl-CoA:acetate CoA-transferase from Acetobacter aceti

KEGG orthology group: None (inferred from 100% identity to xcc:XCC3588)

MetaCyc: 58% identical to succinyl-CoA:acetate CoA-transferase monomer (Acetobacter aceti)
RXN-8807 [EC: 2.8.3.18]

Predicted SEED Role

"Propionyl-CoA:succinyl-CoA transferase"

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.8.3.18

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H2X3B0 at UniProt or InterPro

Protein Sequence (559 amino acids)

>Xcc-8004.706.1 Propionyl-CoA:succinyl-CoA transferase (Xanthomonas campestris pv. campestris strain 8004)
MRSVMSLPPLSRLGRRQGVNAFPPPDRIHHCTIVEAPPRQRSGDNLASPVTRYAPMSDER
ILNAPLRDHLVSAEAAAALIQPGETVAMSGFTGSGYPKAVPMALAQRIEAAHLQGEAFQI
KLMTGASTAPELDGALAKADGIAMRMPFQSDPDARQRINAGTLDYIDIHLSHVAQHVWFG
FYGQIDTAVVEVSAIRADGSLVPSTSIGNNKTWLDLARKVIIEVNDWQPAGLDGMHDVYY
GTALPPHRKPIPLLHGDDRIGEPSLRCDPDKIVAVVRTHGPDRNSPFAAADDSSERIAEH
LIAFLRHEVSKGRLPANLLPLQSGVGNIPNAVLAGLARSGFRDLEAFTEVIQDGMLALLR
DGVLRYASCTGFALSPEGNEEFKRNIDFYRQRIVMRTQEISNHPELVRRLGCIGMNGMIE
ADLYGNVNSTHVMGSRIMNGIGGSGDFARNGFLSIFLSPSIAKAGSISSIVPMVSHVDHT
EHDVSVIVTEQGLADLRGLTPKQRARQLLEHCVHPRYRDALEDYVARANRDSYGKHTPHL
LTEALAWHQRWLETGDMLG