Protein Info for Xcc-8004.5065.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: Mg/Co/Ni transporter MgtE / CBS domain

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 455 transmembrane" amino acids 279 to 299 (21 residues), see Phobius details amino acids 311 to 332 (22 residues), see Phobius details amino acids 353 to 374 (22 residues), see Phobius details amino acids 386 to 414 (29 residues), see Phobius details amino acids 427 to 450 (24 residues), see Phobius details TIGR00400: magnesium transporter" amino acids 13 to 451 (439 residues), 334.5 bits, see alignment E=4.8e-104 PF03448: MgtE_N" amino acids 22 to 123 (102 residues), 67.8 bits, see alignment E=1.6e-22 PF00571: CBS" amino acids 197 to 246 (50 residues), 41.1 bits, see alignment 2.8e-14 PF01769: MgtE" amino acids 313 to 445 (133 residues), 131.5 bits, see alignment E=3.3e-42

Best Hits

KEGG orthology group: K06213, magnesium transporter (inferred from 100% identity to xcb:XC_4079)

Predicted SEED Role

"Mg/Co/Ni transporter MgtE / CBS domain"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H2XE15 at UniProt or InterPro

Protein Sequence (455 amino acids)

>Xcc-8004.5065.1 Mg/Co/Ni transporter MgtE / CBS domain (Xanthomonas campestris pv. campestris strain 8004)
MYNETLRLAEGVDALTAPLAELNTADAVEYLNTLDRGAAAHLLAVLPQPRAVKLLEQPEL
RDASALVAQLPAEHAAVLLGQMADDRATDIFHGLDADQREPLLWRLSAEARLSIQALMRY
PPNTAGALMTTEFVAVPSDWTVGRTLQHIRDVERSRETVYAIYLLDPHTRVLQQVVTMRR
LITGAAEAPIMEVAQVNPPVTVDPALDQEEVARLIRRHDLLAIPVVDACGHVLGIVTVDD
VLDALIAESTEDVHKFGGMEALDKPYMQIGFGQMIKKRAGWLSVLFLGEMLTASAMQHFE
DELSKAVVLTLFIPLIMSSGGNSGSQATSLLIRSLALREIRLRDWWKVALRELPTGLTLG
AILGVLAIVRIAIWQNAGLYDYGPHWQMVALTIGAALVGIVTFGSLSGSMLPFVLQRFGF
DPASASAPFVATLVDVTGLVIYFSIAAAILSGTLL