Protein Info for Xcc-8004.5039.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: FIG032621: Hydrolase, alpha/beta hydrolase fold family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 516 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF00561: Abhydrolase_1" amino acids 106 to 472 (367 residues), 71.5 bits, see alignment E=8.7e-24 PF08386: Abhydrolase_4" amino acids 400 to 498 (99 residues), 54.8 bits, see alignment E=9.1e-19

Best Hits

KEGG orthology group: None (inferred from 100% identity to xcc:XCC3970)

Predicted SEED Role

"FIG032621: Hydrolase, alpha/beta hydrolase fold family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H2XC95 at UniProt or InterPro

Protein Sequence (516 amino acids)

>Xcc-8004.5039.1 FIG032621: Hydrolase, alpha/beta hydrolase fold family (Xanthomonas campestris pv. campestris strain 8004)
MAKHVRTITLVLALAVALGGCQRAGEGVVVATGKAQAAASTVAGNAYGRLQFSPCTLSSG
SAAGNIEAQCAQLQVPENPAAPNGRKLALKIAWLESDAGASHAPDPVFFIAGGPGQSATQ
VAAIVDMGLREVRKHRDIFLVDQRGTGGSHPLECRDAGGTPLVLENDSAATAEQLSAYAA
RCAAGLRNDADPRYFTTSEAIGDLDAVREALGAQQINLIGGSYGTRVAQQYAARYPQHTR
TVVLDGVAPNDLVIGGEFARTFEDAIALQTTQCKAQPACAKRFPVDTRTQLRQVVERLRQ
APAPVDYRDPRTGELHHQEVNADTVAGLAFGFSYAPETASLLPLVLDEAAAGRYASLMAL
AQMSGSDMADQMNRPMQWSVLCSEDAGRYRAPAAQDDTLLGAQVAEMFFAACKTWPSKPT
PAAAFAPFRSTLPVLLLSGQLDPVTPPRYAARVLQGLPNGRHLIAPGQSHGVFRLGCMPK
VLGQFLQTADAKGLDARCVDSLTDVPAFTSFNGWEP