Protein Info for Xcc-8004.4432.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: General secretion pathway protein E

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 575 PF05157: MshEN" amino acids 52 to 161 (110 residues), 63 bits, see alignment E=2.7e-21 TIGR02533: type II secretion system protein E" amino acids 92 to 572 (481 residues), 693.6 bits, see alignment E=6.9e-213 PF00437: T2SSE" amino acids 198 to 464 (267 residues), 360.1 bits, see alignment E=6.5e-112

Best Hits

Swiss-Prot: 100% identical to GSPE_XANCP: Type II secretion system protein E (xpsE) from Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)

KEGG orthology group: K02454, general secretion pathway protein E (inferred from 100% identity to xcb:XC_3573)

Predicted SEED Role

"General secretion pathway protein E"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H2XAZ7 at UniProt or InterPro

Protein Sequence (575 amino acids)

>Xcc-8004.4432.1 General secretion pathway protein E (Xanthomonas campestris pv. campestris strain 8004)
VNAVAVDPIEQRSAETRIVEALLERRRLKDTDLLRARQLQAESGMGLLALLGRLGLVSER
DHAETCAEVLGLPLVDARQLGDTPPEMLPEVQGLSLRFLKQFHLCPVGERDGRLDLWIAD
PYDDYAIDAVRLATGLPLLLQVGLRSEIDDLIERWYGQGRSAMGTIVETADGDASSTDDI
EALRDLASEAPVIRLVNLVIQHAVELRASDIHIEPFESRLKVRYRVDGVLVEGESPPAKL
TAAVISRIKIMAKLNIAERRLPQDGRIMLRVQGKELDLRVSTVPTAHGESVVMRLLDRET
VVFDFYKLGFTEDFLPQFRKVLEQPHGIMLVTGPTGSGKTTTLYTALSQLNTSDVKIITV
EDPVEYQIEGINQIQAKPQIGLDFANALRSIVRQDPDIIMIGEMRDLETARIAIQSALTG
HLVLSTLHTNNAAGGITRLLDMGVEDYLLTSTINGILAQRLVRKLDLANAERYAASPEEI
ERFDLRRLQPDGEIFLYRPRATAAAPTGYLGRTTIVEFLVMNDELRRAVMRRAGMGEIEQ
LARKSGMRTMYEDGLSKALRGETTIEEVLRVTEDA